| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3384 |
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| Symbol | |
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| ID | 4030843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3723395 |
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| End bp | 3724942 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637971795 |
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| Product | hypothetical protein |
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| Protein accession | YP_578574 |
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| Protein GI | 92118845 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.549431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGTG CTGAAAGCCT GGTACGAACG CTGGTTCAGG GCGGCGTCGA CGTTTGCTTC
GCCAATCCCG GCACCTCGGA AATGCATTTT GTCGCCGCGC TGGACCGGGT GGAGGGCATG
CGCTGCGTGC TCGGGCTGTT CGAAGGCGTG GTGACCGGCG CCGCCGACGG CTATTTCCGC
ATGAAGGGCA CGCCGGCCTG CACCCTGCTG CATCTCGGTC CGGGTCTCGC CAATGGCCTT
GCCAACCTTC ACAACGCCAG GAAGGCCAAT TCAGGTATCG TCAATATCGT CGGTCAGCAC
GCGGTCTACC ACATCGGATA CAACGCGCCG CTGACCTCGG ATATCGAGGG GCTGGCCCGG
CCGATGTCGG CTTGGGTCCG CACCTCGCCG GATTCGAAGT CGGTCGCCCG CGACGGCGCG
GCGGCGATTG CGGCGGCAAA AGGTTCACCA CCGCAGATCG CGACGCTGAT CCTGCCCGCC
GACACCGCAT GGAACGAGGC CGACGGCATT GCCGCGGTGC CCGAGACGTC GCAGCGCGCC
GGCTATTCGC CGCAGGCGGT CGATACCGCA GCCAAGATCC TGCGCGGCGG CGGCGGCGAG
ACTCTGCTTC TGCTCACGGG CGGCGCGCTG ACCGAACCGG GACTGGCGCT GGCTGCCGGT
ATCGCGGGCA AGACAGGCTG CAAGGTGATG GGCCAGACCT ATAACCCGCG CATGGCGCGC
GGGCGCGGCC GCTTTTCCAT CGAACGCATC CCATACGTGA TCGAGCAGGC GTTGCCGGTC
CTTAAAGACT TCAGGACCAT CATCCTGGTC GAGGCCAACG ATCCCGTCGC GTTCTTTGCC
TATCCGGACA AGCCGAGCCT CTTGAAGCCC GAGGACTGCG AGGTGCATCG CATGACGGCG
AGCGGCGAAG ACTCGGTGGC CGCGCTTGAA GCGCTGGCGG GTGCTGTTGG CGCCAGGCCG
CAGGATGCGA AGCCGCAAAA GCCGATGGAA ATTGCGTGGC CGGCGGGGCC ACTCAACCAC
GCGTCCATCG CGCAGGCGAT TGCGATGGCA ATTCCGGAAA ACGCCATCAT CGTCGACGAG
TCGATCACGA CGGGGCGCGG ATTCTTTCCG CCGACCGCCT CTGCTGCGCC CCATGACTGG
TTGCAGAACA TGGGCGGTTC GATCGGATTT TCGACGCCGG TGGCGACCGG CGCCGCGATC
GCCTGTCCCG ACCGCAAGGT GATCTGCATG GTCGGCGACG GCAGCGCGAT GTACACGCTG
CAATCGCTGT GGACGCAGGC GCGCGAAGGG CTCGACGTCA CCACGATCGT TTTCTCGAAT
CGAATCTATC GGATTTTGCA CGGCGAGTTC GAGGGCGTCG GCGCCGGCGA GCCGGGCCGG
CGGGCGATGG ACATGCTGAG CCTCGACCGC CCGGCGCTCG ACTGGGTGGC GCTTGCCAGG
GGCATGGGCG TGCCGGGGCG AGCCGTGACG ACCGCGGACG ACTTCAACGA GGCGCTTGCC
AGGGCAATTG CCGAAAAGGG GCCGCGCCAG ATCGAAGTGC AGATGTGA
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| Protein sequence | MNGAESLVRT LVQGGVDVCF ANPGTSEMHF VAALDRVEGM RCVLGLFEGV VTGAADGYFR
MKGTPACTLL HLGPGLANGL ANLHNARKAN SGIVNIVGQH AVYHIGYNAP LTSDIEGLAR
PMSAWVRTSP DSKSVARDGA AAIAAAKGSP PQIATLILPA DTAWNEADGI AAVPETSQRA
GYSPQAVDTA AKILRGGGGE TLLLLTGGAL TEPGLALAAG IAGKTGCKVM GQTYNPRMAR
GRGRFSIERI PYVIEQALPV LKDFRTIILV EANDPVAFFA YPDKPSLLKP EDCEVHRMTA
SGEDSVAALE ALAGAVGARP QDAKPQKPME IAWPAGPLNH ASIAQAIAMA IPENAIIVDE
SITTGRGFFP PTASAAPHDW LQNMGGSIGF STPVATGAAI ACPDRKVICM VGDGSAMYTL
QSLWTQAREG LDVTTIVFSN RIYRILHGEF EGVGAGEPGR RAMDMLSLDR PALDWVALAR
GMGVPGRAVT TADDFNEALA RAIAEKGPRQ IEVQM
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