Gene Nham_3378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3378 
Symbol 
ID4029668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp3718239 
End bp3719114 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content70% 
IMG OID637971788 
Product3'(2'),5'-bisphosphate nucleotidase 
Protein accessionYP_578568 
Protein GI92118839 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase 
TIGRFAM ID[TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGCCAC CACAAGGCGG TCGCCGCCGT TCTGCGACAC CGTGCAAGGA AGCTGCGAAC 
GTGCCGGTGA TCGACGCTCA ATCCGCTACG GCGCTGATGG ATGCGCTGAC GGCGCTGGTC 
GCGAAGGCCG GCACCGCCGT CCTCTCGGTC AAGCGCGATC GCATGACGAT CGGCGGCAAG 
GCCGACGGAT CTCCGGTCAC GGACGCGGAT CTCGCCTCCG ACCGCATCAT CGCCGAAGGG 
CTCGCGCGAC TCTGCCCCGA TATTCCGGTG CTATCGGAGG AGCGCGTGCA TCTGGCGACG 
CCGCCTTATG TCGGCAGCTT CTTCCTGATC GATCCGCTGG ACGGCACCAA GGAATTCATC 
GCCGGCCGCG ACGAATTCAC GGTCAACCTC GCGATCGTGA CCGACGGCGT GCCGCTTTTC 
GGAATCGTCG GTGCGCCGGC GCTCGGCTCG ATCTGGCGCG GCCTTGTCGG CCACGGCGCC 
CAGCGCCTCG CGGTCGCGCC CGACAGCGAC GTCGGCGGCG CGGAGCCAAT CGCGACCCGA 
CCGTTTCCCG GCCGCGGCTG CCAATGGATT GCCGCCGTCA GCCGTTCGCA CGGCGACAGC 
CGTTCGAACG CCTTCATCGA CAGCCGGCCC GGCGCGGTGC GCAAGCCGCT CGGCTCCGCG 
GTCAAGTTCT GCCGGATCGC GGAGGGCGGC GCCGACATCT ATCCCCGCCT TGCCCCGACC 
AGCGAATGGG ACGTTGCGGC AGGTCACGCT TTGGTCGCCG CCGCCGGCGG CAAGATCACC 
GACGGGCGGG GCGCGCCGCT GCGTTTCGGC GAATCGCGCG AAGGATTTCT GGTGCCGGAG 
TTTATCGCCT GGGGCGATCC CTCGGCCGCG CCTTGA
 
Protein sequence
MLPPQGGRRR SATPCKEAAN VPVIDAQSAT ALMDALTALV AKAGTAVLSV KRDRMTIGGK 
ADGSPVTDAD LASDRIIAEG LARLCPDIPV LSEERVHLAT PPYVGSFFLI DPLDGTKEFI 
AGRDEFTVNL AIVTDGVPLF GIVGAPALGS IWRGLVGHGA QRLAVAPDSD VGGAEPIATR 
PFPGRGCQWI AAVSRSHGDS RSNAFIDSRP GAVRKPLGSA VKFCRIAEGG ADIYPRLAPT 
SEWDVAAGHA LVAAAGGKIT DGRGAPLRFG ESREGFLVPE FIAWGDPSAA P