Gene Nham_3355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3355 
Symbol 
ID4032734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3694001 
End bp3695065 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content52% 
IMG OID637971764 
Producthypothetical protein 
Protein accessionYP_578546 
Protein GI92118817 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2856] Predicted Zn peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000160143 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAACC CACGAAGGCT TAGCCTTGCG CGGATGCGAC GGCGCAAGAC CGCTAGAGCG 
CTTGCTGAAG AAACCGGGCT GGCCGCGGAT ACGATTTCGC GGCTTGAGGC GGGCAGTAAT
GCGCCTGACG AAACGACAAT TGAAAAGCTC TCTAAAGCTC TTGGTTTCCC TGTTGCGTTT
TTCATGGACG CCGATCCGGA AGACATAGAT ACGGGTGCCG TCAGTTTCCG CAGCTTTTCC
AAAATGAGCG CGCGGGAGCG AGATGCGGCG ATCTCGGCTG GTTCGCTTGG GTTGCAGTTG
AGTTTCTGGG TTGAGGCGAA ATTTAGCCTG CCAAAGCCGA ATTTGCTGGA CCTTAGCTAT
GAAACAAACC CAGAAGCTGC GGCTATCTCT CTCAGACAGT ATTGGGGATT AGGCGAGCGA
CCAATTGGTA ACATGTTGGC ATTGCTGGAA ACCCAAGGTG TGCGCCTTTT CTCTCTTTCG
GAAGATACGG CTTCGGTGAA TGCGTTTTCC TTCTGGAGAG ACGATAAGCC GTTTGTCTTC
TTGAACAACT TCAAAACCGC CGAAAGCAGC ATCTACGACT CGGCTCACGA GCTTGGCCAT
CTCGTTTTGC ATAAGCACGG CGACCCAAAG GAGACGCGTT CAGCAGAAAG GGAGGCTAAC
GCTTTTGCGT CAGCATTTTT GATGCCCGCA AAGGACGTTA AGGCAAGGGT GCGGCGGCCG
ACTATCGAAA CGGTTTTGAC CGATAAAGCC CGCTGGCGCG TGTCAGCGAT GGCGTTCGCT
TATCGTTTAA ACAAGCTCGG TCTTCTCTCC GAGTGGCACT ACAAATCGAC GTGTATTGAA
CTCGGTAAGA GGGGCTATCG GCTAGGCGAG CCAGTTGGAA TTGAGCGCGA AACCTCAATC
ATTTGGAAGA AAGTTCTATC GCAACTTTGG TCCGAGCGAA CCACGAAAAA TGACATCGCT
CTTAGCCTAA ATCTCCCATT GGATGAGTTG GAAGGCCTTA TTTGGAATCT AGCTGGTCCG
GAAGTCAGAC CGAAAATCGG CGGAGAACTG CGGGCGATTA AGTAA
 
Protein sequence
MFNPRRLSLA RMRRRKTARA LAEETGLAAD TISRLEAGSN APDETTIEKL SKALGFPVAF 
FMDADPEDID TGAVSFRSFS KMSARERDAA ISAGSLGLQL SFWVEAKFSL PKPNLLDLSY
ETNPEAAAIS LRQYWGLGER PIGNMLALLE TQGVRLFSLS EDTASVNAFS FWRDDKPFVF
LNNFKTAESS IYDSAHELGH LVLHKHGDPK ETRSAEREAN AFASAFLMPA KDVKARVRRP
TIETVLTDKA RWRVSAMAFA YRLNKLGLLS EWHYKSTCIE LGKRGYRLGE PVGIERETSI
IWKKVLSQLW SERTTKNDIA LSLNLPLDEL EGLIWNLAGP EVRPKIGGEL RAIK