| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3342 |
|---|
| Symbol | |
|---|
| ID | 4032255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 3685467 |
|---|
| End bp | 3685931 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637971752 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_578534 |
|---|
| Protein GI | 92118805 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5478] Predicted small integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.695498 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAGTA ACGACGAGCG CCAACCAAAG CAATCTGGCC GTGCGGCCAA GATTTTCGGC
AATATTGCAA ATCGGGCGTC ATGGGCGGCC GGACGGGCCT CAACGTTCAT GATCGCGGCT
GCTGTTGTAG TAGTCTGGGC TGTGACGGGG CCGATATTCA AGTTCTCAGA TACGTGGCAA
CTCGTGATTA ACACGGGCAC CACCATCGTG ACTTTTCTCA TGGTGTTCTT GATTCAGAAT
TCTCAAAACC GTGATGGTGC AGCCATCCAG GTGAAGCTCG ATGAGCTTAT CCGGGTAAGT
AAGGCTCATA ATTCGTTTGT AGGCATTGAG CATTTGACCG ATGAAGAGCT CGAAGATATC
CGCGAGAAGT GTGAACTCCG TGCGGAGGCC GAAAAGGCCG GCGAGCAGTC CGTCGCGCGA
ACCGGGAAAG AAGCTAAGTT AGCGGCCGGC AAAGCGGTAG CGTGA
|
|---|
| Protein sequence | MLSNDERQPK QSGRAAKIFG NIANRASWAA GRASTFMIAA AVVVVWAVTG PIFKFSDTWQ
LVINTGTTIV TFLMVFLIQN SQNRDGAAIQ VKLDELIRVS KAHNSFVGIE HLTDEELEDI
REKCELRAEA EKAGEQSVAR TGKEAKLAAG KAVA
|
|---|
| |