Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3326 |
Symbol | |
ID | 4032781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 3668891 |
End bp | 3670327 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637971736 |
Product | phage tail sheath protein |
Protein accession | YP_578518 |
Protein GI | 92118789 |
COG category | [R] General function prediction only |
COG ID | [COG3497] Phage tail sheath protein FI |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.833077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTTCTG TGTCCTTTCA CCACGGCGCG CGCGTCTTCC AGTCCGGCGA AACCCCGGTG CTGGTGCGCA CCGCGCAGAC CGCCGTCATC GGCCTGATCG GCACCGCCGA AGATGCCGAT GCGGTCAAGT TCCCGCTCAA CAAGCCGATC CAGCTGTTGC GGCCTTCCGA TGCCGAAGGA CTCGGGGCTG ACGGCACCTT GATGGAGGCG ATCGACTCGA TTTTCGATCA GGTCGGTTGC CCGATCATCC TGGTGCGGGT CGAGGAGGGC GCGACCACGC CGGAGTCATG GGCTAACGCG GTCGGCAATC AGGTGGCCTT CACCGGGGTC CATGCCTTCC GCCGCGCCAA GCCGGATGGC CTCTACAAGC CGAAGCTGTT GCTGGCGCCG GGCCTGACCC AGACCAGTCC GGCCGATGGC ATCGCGTCGG TTGCGGTCAC CGTCGGCGGC GCCGGCTATG TCGCCGACAC CACGACGGTC ACGATCGCGG GCACTGGCGG CGTCGGGTCG GGCGCCGAGG CCAAGGCTGT GGTTGAGGCG GGTATCATCA CCTCGATCCT CGTGACCAAG CCGGGTTATG GCTACACCGG CGCCGTCACC GTCACCATCA CTGGCGACGG CGCGGATGCG ACCGCGACCG CCGCCAAGGG CTCGGTGATC AACCCCGTCG TCGCCGAGCT GATGGGCGTG GCCGAAACCT TGAAGGCGAT GGCCTATGTC GATGCTCCGG ATACCACCGA CCAGGCGGCG GTGCAGTATC GCGGCCTGAT CAACTCCGGC CGTATCTTCG TGTGCGACCC GAAGGTGTTG AAATTCGACA CCGCCCAAGC GCTCAACGTG CCGCAGCCGT CGTCGCCGAT CTTCGCCGCG CGCCAGGCCA AGATGGATCT GGAGCAGGGC TTCTGGTGGG CGGGCTCGAA TACCGAGATC GCCGGCATCG TCGGCACCAA CCGGCCGATC GAATACGGGC CGCAGTCGAA CTATCTCAAC GAAAACCGCG TCAACACCAT CGTCAACATC GACAACACCG GGTTCCGGCT GTGGGGTGTG TGGACCTGCG ATAGCGAACT GCTCTGGCAG TTTGTATCGG TGCGGCGCAC CGCCGACGCG ATCAACGAGG CGCTCGAGGT GGCCTATCTC GAATTTGTCG ACCGGCCGTT CTCGAAGGCT AACCTCAAGT TCATGATCGA GGCCGGCCGT GCCTTCCTGC GCACCATGGA ATTGGAAGGC GCGATTCTGC CCGGTCATGA CGTCTGGCTG CTCGACAGTA ACACCGACAA CGATCTGGCG CAGGGCATCG TCAAGCTCGG CGTCAAGTTC GAGCCGCCGG CGCCGATGGT CGATATCCGC ATCACCAGCT ATCGCAACAT CGCCAGCTAC ACCCTGCTGC TCAATCAGGT GGCGCAGGAA ATCAGCTCCG GGTCGCTGGC CGCGTAA
|
Protein sequence | MASVSFHHGA RVFQSGETPV LVRTAQTAVI GLIGTAEDAD AVKFPLNKPI QLLRPSDAEG LGADGTLMEA IDSIFDQVGC PIILVRVEEG ATTPESWANA VGNQVAFTGV HAFRRAKPDG LYKPKLLLAP GLTQTSPADG IASVAVTVGG AGYVADTTTV TIAGTGGVGS GAEAKAVVEA GIITSILVTK PGYGYTGAVT VTITGDGADA TATAAKGSVI NPVVAELMGV AETLKAMAYV DAPDTTDQAA VQYRGLINSG RIFVCDPKVL KFDTAQALNV PQPSSPIFAA RQAKMDLEQG FWWAGSNTEI AGIVGTNRPI EYGPQSNYLN ENRVNTIVNI DNTGFRLWGV WTCDSELLWQ FVSVRRTADA INEALEVAYL EFVDRPFSKA NLKFMIEAGR AFLRTMELEG AILPGHDVWL LDSNTDNDLA QGIVKLGVKF EPPAPMVDIR ITSYRNIASY TLLLNQVAQE ISSGSLAA
|
| |