Gene Nham_3311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3311 
Symbol 
ID4032766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3655484 
End bp3656698 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content61% 
IMG OID637971721 
Productphage integrase 
Protein accessionYP_578503 
Protein GI92118774 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGCA AGTCCAAAGG TGCCCGACTC CATCTTAAAG CTGCCCGGCG AGATGAAACC 
GGGAGTATCA CCCACCGGGC AACCTGGATC ATCCGCGACA ATGGACGGGA CTTCTTCACA
GGATGCGCTG AGGAGGAAAC TGCAAAGGCT GAGCGGGCTC TCGCAGAATA CATAGCCAGC
AAGTACGCGC CGAAGCGCAA GGTCCAGGAT ATCGAGAAAT TACCGATCGG AGACGTTCTA
TCGATTTACC TCGATGCCGA GTTGGCAGCG CTCCGTGAAC GCTTCAAGGT CACTGAGGCT
GACGAGGATA CGATTGCGCA GATCCGCAAG TTCAAGACCC GCATCGGCAG GTTGAACGAC
TGGTGGGGAG CCAAGATGCT CTCGGCAGTC GATGGCGAGG AATGCCGGTC CTATGCCAAG
CACCGTGGGA ACAAGGGCGG TGCCCGCCGC GACCTTGAAG ACCTGCGCGC TGCGATCAAC
CATCACGCTG GCGAAGGCTA TCACCGCGGC GTCGTCAAGG TGACGCTGCC GGCAAAGGGC
AAGGCCCGGG ATCGTTGGCT GACGCGCTCC GAGGCGGCCA AGATGATCTG GACCTGCTGG
CGTTACCGCG AAATTCAGAC GGTCCACCGT GGCCCGCTGA GGCACGTAAC TCGCTTCATC
CTGATAGGCG TCTACACCGG TACGCGCGCA GCATCGATCG CGGCGGCCTC ACCGATCCCG
GCAATCGGGC GGTCCTATGT CGACCTTGAG CGCGGTCGTT TCTATCGTCT GCCACGCGGC
GCCATAGCGA CCAACAAACG TCAGCCGACC GTACCCCTCC CCGAGCGCTT ACTGGCCCAT
ATGCGGCGCT GGCACCGCAT CGATCCGGAC TCGAAGCACT TCGTTGAGTT CAACGGAAAG
CCGGTGACGT CGGTCAAGAC CGGCTTCAAG CGCGCCGCGA CTCTCGCGAA GCTGTCGGTG
GAGGACGGTA ACGTGTCGCC CCACACACTA CGACACACCG CCGCGACCTG GCTGATGCAG
CGCGGAGCCG ATCCGTGGCA AGCGTCTGGC TACCTCGGCA TGTCGTTCAA GATGCTGATG
GACACTTACG GCCACCATCA CCCCGATTAC CTCGAGGACG CGGTGAAGAA GATCGCCGCG
CGCGATCCAA AGGATGAACA GAAGAAGGAC GTTTCTGGTG CGGTAACTGG TGCGGTTGTG
CCGTTCAGGA AATAG
 
Protein sequence
MPRKSKGARL HLKAARRDET GSITHRATWI IRDNGRDFFT GCAEEETAKA ERALAEYIAS 
KYAPKRKVQD IEKLPIGDVL SIYLDAELAA LRERFKVTEA DEDTIAQIRK FKTRIGRLND
WWGAKMLSAV DGEECRSYAK HRGNKGGARR DLEDLRAAIN HHAGEGYHRG VVKVTLPAKG
KARDRWLTRS EAAKMIWTCW RYREIQTVHR GPLRHVTRFI LIGVYTGTRA ASIAAASPIP
AIGRSYVDLE RGRFYRLPRG AIATNKRQPT VPLPERLLAH MRRWHRIDPD SKHFVEFNGK
PVTSVKTGFK RAATLAKLSV EDGNVSPHTL RHTAATWLMQ RGADPWQASG YLGMSFKMLM
DTYGHHHPDY LEDAVKKIAA RDPKDEQKKD VSGAVTGAVV PFRK