Gene Nham_3303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3303 
Symbol 
ID4029381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3646633 
End bp3648042 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content54% 
IMG OID637971714 
Producthypothetical protein 
Protein accessionYP_578496 
Protein GI92118767 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGACAG CTCCATACCG GTCAATACGT CTGCTTGTTG TGCTCGCGAC GGCAGTCTCC 
TCGTTCCCTG CCACTGCTCA GGTGAGCAAA AGAAGTCCGT CCGCCGCGGC ACCCGCCGCG
TCAACTAAGG TCACGTTAGG TGCCATTCGG TGGGATAATT GGAGTCTCGA CAGTCCCTAT
GGGCAGGTCC TGGCCGACCC TGGATTGCGA GAGCGCGTTC CATATTACAC AGAACGTCTG
CCGAATGGAA AACTGGGTTT TCCCGGAAAC ACCAAAAGAG CACTTAATGC GGACGTACAC
TACGCGAAGG CTGCAGGCTT GGATTATTTC ATATTTGGCT ATTATCTGGA GAGTGCTGCT
TGGGGACGTA ATCCAAGTCA TGCCGCAGCG CTCAATCGGG CGCTAACAAA TTTTGTTCTC
CTTCCGGACA AACTTGGCAT CAAGTACGCT CTAAACTTTA ACCTATCATT CCCCTCTCGT
GATGTGCCGA TGGTTAGTGC TGCAATCACC AAGGCGCTAC TTGGGCCCGA TTACATGCGT
ACGAGCGACG GCTCGGCCCC TGTGTTTTTT TTAGTTAATA CAATGGCTAC CTGGTTAAAA
GGTCTGGGAG GCGAGCAGGG CGCAAAAGCA GCCCTGAACG ATATGAGGAA CCGTGTTAAG
GCCGCTACTG GCCGAGATCT CTATCTGGTT GCCTTACTCT TTAACCTGTC AGAGACAGAG
CCAGTTGCTC ACAGGCTGGG ATTTGATGCG GTTAGTACAT ATGCGACCGC CCTTGGGTCG
AATGGAAAAT CTCTGTCGTA TGGCAGTTGC GCCGCCCTTG CACAGAACGC ATGGCGAGTG
GAAGCCAAAG ATGGCTCGGG AGGCTTTCTA CCAACCGTTA CGCTTGGGTG GGATTATCGT
CCGGCTTTGC GCGATCCTCA GGAGAAGAAA AATCGCAAGC CGAATCCTGA TTGGTGTCAA
CCTGCCACCG ATGAGGAATG GACACGGCAA ATCCGTGGTG CAATCAATGA GGCGGCTAAC
AATCCGCGCA ACGATCGCTT CCAGAGCGTT GTGATATATG CTTGGAATGA AAGCTCCGAA
GGTGGCTGGA TTCAGCCAAC GCTATCTGAA GGCGTGCGAC GGCTCAAAGT GATAGCTAAC
GCGGTGGGCC GACACCCGAC AATTCCGCCC TTCAAGCTCG TATGGCCGAC CCGGATCGAT
CCAAAGACGT GCCCCGTTGG TTCGTCATCC ATATCAACTA CAACGGCAGA TGCTGGATGC
AAATCGGCCA ATGATTCGAT GACGAGTGCG TGGCCATGTC CGCCAGGCAT GCAGATCGCC
GGAGAGAAAT TGCGCAAAGG ACCTTCAGAG GAAGGGGGGA AAATATCGCT TATCTGGCAA
GAAAGGCTTT GTGCTCCACA GGGCAGATAA
 
Protein sequence
MWTAPYRSIR LLVVLATAVS SFPATAQVSK RSPSAAAPAA STKVTLGAIR WDNWSLDSPY 
GQVLADPGLR ERVPYYTERL PNGKLGFPGN TKRALNADVH YAKAAGLDYF IFGYYLESAA
WGRNPSHAAA LNRALTNFVL LPDKLGIKYA LNFNLSFPSR DVPMVSAAIT KALLGPDYMR
TSDGSAPVFF LVNTMATWLK GLGGEQGAKA ALNDMRNRVK AATGRDLYLV ALLFNLSETE
PVAHRLGFDA VSTYATALGS NGKSLSYGSC AALAQNAWRV EAKDGSGGFL PTVTLGWDYR
PALRDPQEKK NRKPNPDWCQ PATDEEWTRQ IRGAINEAAN NPRNDRFQSV VIYAWNESSE
GGWIQPTLSE GVRRLKVIAN AVGRHPTIPP FKLVWPTRID PKTCPVGSSS ISTTTADAGC
KSANDSMTSA WPCPPGMQIA GEKLRKGPSE EGGKISLIWQ ERLCAPQGR