| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3298 |
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| Symbol | |
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| ID | 4029376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3638415 |
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| End bp | 3641567 |
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| Gene Length | 3153 bp |
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| Protein Length | 1050 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637971710 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_578492 |
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| Protein GI | 92118763 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAATC CGATCGTCGC GTTTGCGTTG AGGCAGCGCG TTCTGATGCT GGTCATGTTC
ATCATGACGC TGGCCGGCGG GATCGCTGCG TTCAGGGTCC TGAATATCGA GGCCTATCCC
GATCCCGTTC CCCCGATGGT GGATGTGATC ACTCAAAGCG CGGGGCTTTC GGCCGAAGAA
ATCGAACGTT ACATCACGAT TCCGATCGAA ACGCAGCTCT CCGGCGTGCC GAACCTCCAT
GTGATGAGAA CCATCTCTCT TTACGGCCTG TCGGACGTCA AGCTGCAGTT CACCTATGCC
TATACCTACG ACGAGGCGCT CCAGCATGTG CTCAACCGTC TGTCGCAGCT CTCCGGGTTG
CCGGATGGTG TTCAGCCCGG GATCAGTCCG GTCAGTCCGA TTGGTGAAAT CTATCGCTAC
AGGCTGGTCG GCCCGCCGGG CTACAGCGTG CTCGATCTGA AGACCCTTCA GGATTGGGTT
CTGCAGCGCC GTTTCCGCGC CGTTCCCGGT ATTGTGGATG TCGTTGGCTG GGGAGGAAAG
ACCAAGACCT ACGAATTGCA GGTCGACCTC GACAAGCTCA TCGCCCACAA CCTCACGCTG
TCGCAATTGC TGCAGACGTT GCGTAGCAGC AACCTGAATG TCGGCGGAAA CATCGTCGAT
CTCGGCACGC AGTCGGCGGT CGTTCGCGGT GTTGGCCTGA TTCGGTCGAT CGACGACATC
AACAATACCA TGCTGACCCA GGCCGGCGGC AATCCGGTGC TGATCCGCGA TGTCGCCACG
GTGATCGTCG GCCATCAACC CCGCCTCGGT ATTGCAGGCC AGGACAACGA CGACGATATC
GTCGAGGGTA TCGTTCTGAT GCGCCGCGGC CAGCAAAGCA CCCCCACGAT CGAGCGGGTG
AAGGCGGAGG TCGAGCACAT CAACACCTCC GGCATTCTGC CACCGGGTGT TCGAATCGAG
CGCATCTACG ACCGTCAGGA CCTGATCGAC ACGACGACCC ATACTGTCCT GCACAATATG
GTGTTCGGCA TTCTGCTGAT CTTCGCGTTG CAGTGGCTGT TTCTCGGCAA TCTTCGCAGC
GCCCTGATCG TAGGCGCAAC GATTCCGTTC GCGCTGTTTT TCGCCATCGG CATTATGGTT
CTACGCGGAG AGTCCGCCAA TCTATTATCC GTCGGAGCAA TCGATTTCGG CCTGATCGTC
GATGCGACAG TCATCATGGT GGAGCGGATA TTCCGGCAGC TCGGGCATGA TGCTCCCGCT
CCGTCATCGG TGAGCGACGA ATCATCCGGG TTCAGCGGAC GGCTGCTCGC CATTTACACA
GCGAGCATCA GCGTCAATCG CTCGATCATG TTCGCGACCG GAATCATTAT CGCAGGGTTT
ATTCCGCTGT TCACCATGAG CGGTGTGGAG GGGCATATCT TCGGCCCGAT GGCGAAGACT
TATGCTTACG CGATTGCCGG AGGATTGATC GCGACATTCA CCGTGACTCC CGCGCTCAGT
GCACTGCTGC TGCCTGAGCG TGTCCAGGAA ACTGAAACCT GGCTGGTGCG GACGCTTCAT
CGCTTTTACA GCCCGGTTCT GCGGCTTGCT GTCGCGAACC GGAGGCTGAC GGCCGTTCTG
GCGCTGGCGG TGTTTATTCT GGCGGTCGTC GCTATGCGCT TTCTGGGACT GGAATTTCTC
CCCAAGCTGG AGGAAGGCAA TCTCTGGGTG CGGGCCACGA TGCCGGCGAC GATCTCGCTT
CAGGAAGGAA ATGGCTACGC CAACCGCATG CGCAAGGTGA TCCGCAGTTT CCCCGAAGTG
GAAACGGTCG TCACCCAGCA CGGCCGCCCG GATGACGGAA CGGACGCCAC GGGCTTCTTC
AATGTCGAAT TCTTCACGCC GCTGAAGCCG ATCAGCCAGT GGCGCCCCGG ATTGAACAAG
GAAAAGCTGA CGGAGGAAAT CCAGGCCCGG CTCGAAGCGG AGTTTCCGGG AATCGAGTTC
AATTTCTCGC AGTACCTGCA GGACAATGTC GCCGAGCAGG TGTCAGGCGT GAAAGGCGAA
AACTCGATCA AGATTTTCGG CAACGACTTG CAGGAACTGA CCGATACGGC CGACAAAATC
AAGGCGGTGC TGGCCACGGT GCCGGGGATA ACGGACCTCG GCGTATTCAC ATCGCTCGGT
CAGCCAACCA TACAGATCGA TATCGACCGC GAGCGCGCCG CGCGCTACGG GTTGTCGCCC
GGCGATATCA ATTCGACGAT CCGCACCGCT GTCGGCGGTG AATCTGCCGG CGACGTCTAC
GAATCGGGAA GTGATCGGCA CTTCCCGATC GTCGTACGGC TGGCGCCGCA ATATCGTCAA
AGCGCGGAAG CCATCAGCAA GTTGACGATC GGCGCGTCGG GTCCGAAAGG AGTGACGCAG
ATCCCGTTGA GCGAGGTTGC AAGCATCCGG CTCGTCACAG GCCCGTCATA TATCTACCGG
GAACAGCAAC AGCGCTACTT GCCGATCAAG TTCAGTGTCC GTGATCGCGA TCTGGGCAGC
ACCATCAAGG AGGCTGAACA GCGGATCGCA CAGGAAGTGC AATTGCCTGC CGGAACCCAT
CTCCAGTGGG TCGGCGAATT CCGCAATCTG CAGGAGGCGA TCGGACGGCT GCAGATTGTC
GTGCCGTTCA GTCTTGCCAT TATCGGGCTG TTGCTTTGGA TCAATTTCAC ATCCGTGCGC
GACATGCTGC TTGCAATGAG CGTCATTCCG ATGGCCGTGA TCGGCGGCAT CTTTGCGCTG
TTCGTGACCC AGATTCCGTT CAGCGTCTCG GCGGCTATCG GCTTCATTGC GCTGTTCGGC
ATTTCGGTGA TGAACGGCAT CTTGATCCTG TCGCAGTACA ACCAGCTCAT CGAGTCGGGT
CGGCAGCGGA TCGACGCGAT CGTGCAGGCG GGTGAGGCTC AAATGCGCCC GGTCCTGATG
ACGTGCGTCA TTGCGGGAAT CGGCCTGTTG CCGGCCGCGA TGTCCACTGG AATCGGATCG
CAGGTGCAGA AGCCGCTGGC GGTCGTGGTG GTCGGCGGAA TGACGGTTGC TCCGCTTGTC
ATCCTCATCG TATTGCCCGC TCTGATCTCG CTATTTTCTC GTCGAAAAAT GGTGGCTGAA
GCTACCGAAT CGGCACTTGA ACCGGCAGAA TAG
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| Protein sequence | MINPIVAFAL RQRVLMLVMF IMTLAGGIAA FRVLNIEAYP DPVPPMVDVI TQSAGLSAEE
IERYITIPIE TQLSGVPNLH VMRTISLYGL SDVKLQFTYA YTYDEALQHV LNRLSQLSGL
PDGVQPGISP VSPIGEIYRY RLVGPPGYSV LDLKTLQDWV LQRRFRAVPG IVDVVGWGGK
TKTYELQVDL DKLIAHNLTL SQLLQTLRSS NLNVGGNIVD LGTQSAVVRG VGLIRSIDDI
NNTMLTQAGG NPVLIRDVAT VIVGHQPRLG IAGQDNDDDI VEGIVLMRRG QQSTPTIERV
KAEVEHINTS GILPPGVRIE RIYDRQDLID TTTHTVLHNM VFGILLIFAL QWLFLGNLRS
ALIVGATIPF ALFFAIGIMV LRGESANLLS VGAIDFGLIV DATVIMVERI FRQLGHDAPA
PSSVSDESSG FSGRLLAIYT ASISVNRSIM FATGIIIAGF IPLFTMSGVE GHIFGPMAKT
YAYAIAGGLI ATFTVTPALS ALLLPERVQE TETWLVRTLH RFYSPVLRLA VANRRLTAVL
ALAVFILAVV AMRFLGLEFL PKLEEGNLWV RATMPATISL QEGNGYANRM RKVIRSFPEV
ETVVTQHGRP DDGTDATGFF NVEFFTPLKP ISQWRPGLNK EKLTEEIQAR LEAEFPGIEF
NFSQYLQDNV AEQVSGVKGE NSIKIFGNDL QELTDTADKI KAVLATVPGI TDLGVFTSLG
QPTIQIDIDR ERAARYGLSP GDINSTIRTA VGGESAGDVY ESGSDRHFPI VVRLAPQYRQ
SAEAISKLTI GASGPKGVTQ IPLSEVASIR LVTGPSYIYR EQQQRYLPIK FSVRDRDLGS
TIKEAEQRIA QEVQLPAGTH LQWVGEFRNL QEAIGRLQIV VPFSLAIIGL LLWINFTSVR
DMLLAMSVIP MAVIGGIFAL FVTQIPFSVS AAIGFIALFG ISVMNGILIL SQYNQLIESG
RQRIDAIVQA GEAQMRPVLM TCVIAGIGLL PAAMSTGIGS QVQKPLAVVV VGGMTVAPLV
ILIVLPALIS LFSRRKMVAE ATESALEPAE
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