| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3292 |
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| Symbol | |
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| ID | 4029370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3630226 |
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| End bp | 3632541 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637971704 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_578486 |
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| Protein GI | 92118757 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAACA TCGGGTCAGG GGTTGAGCGT CACGGTTGGC GCTGCTTATT GTTGTCGACC
AGTGCAGCGG TGGTGCTTGG CGCCGGATTG TTGCTCGATT GTACCCCGGC GCTGGCTCAA
CAGGAACAGT CATCTGCAAA TCCGTTGCCG CCGATTCACG TATCGCCGCC GCAACAGAGA
ACCCGTCGAG CCCGATCGAC GCCCAACACA TCGAGAGCGG CGCGACCGAG AGGGCGGACC
GTCGTTGCCG CGCCTTCGGA GAAGAAGTTT CCGAGCGTGA GCAGCCAGGA CGCGAGGACC
GGACAGACAG GTTACGTCAC ACAGAGCACG AGCAGCGGAA CGCGAACGAA CACCGCTTTG
ATCAATGTCC CTCAGTCAAT CTCCGTTCTT ACGAAAGACT TCATCAAGGA CCAGTCTTTC
ACCTCGATCG GCGAAGCGAC CCGGTATGTG CCCGGCGTCA TCTATCATCA GGGCGAGTCC
CATCGGGACG ACCTGGTGAT CCGCGGGCAG CGAAGCAATG CGGACTTCTA CACGAACGGA
ATCCGGGACG ACGTGCAGTA TTTTCGCGAT TTCTACAATT TGCAGAGGCT CGAAGTCTTG
AAGGGCCCCA ACGCCATGAT CTTCGGGCGT GGCGGCGGCG GCGGCGTGAT CAATCGTGTG
CTGAAGGAGG CCGATGGCAC GACCGTGCGC GAGGTGACAG TCGGCGGCAA CTCCTATCCG
GGCGCGCGCG TGACGACCGA TATCGGGCAG GCCGTCAACG AGAACTGGGC GGCGCGCTTC
AATGCTATGT ATGAAAATAC AGAGAGCTAT CGGGATTTCG TCAATCTCGA GCGCTGGGCC
GTCAATCCAA CCGTCACGTT TGCGCCAAAC GATACCACGA CGGTCAAGTT GAGCTACGAG
CATCTGCACG ATCGCCGCAC CGTCGATCGT GGTATTCCCT CGCAGATCCT CCCGGGCAAC
GCGTTGCCGA GGCCTCCGTA CGATACGTCG GCATCGACAT TCTTCGGCAA TCCAAATCTG
AACTATGCGC TCGCTGATGT CGACATCGGC ACTGCCGTTA TCGAGCATGA TTTCGAAAAC
GGGTTCACGG TCCGCAATGC GACCCAGGCG GCGCGCTACG ACAAATTCTA CCAGAACATT
TATCCTGGCG GCGGAGCGAA CTCGGGCGCA GTGAATGTTG CCGGTACTTC GAGTAATTTG
TCCGCCTACA ACAACGAGAC GGATCGTACC AACCTCTTCA ATCAAACGGA CCTGACATAC
AAGTTCGACG CCGGGATCAC GCGCCATACT GTTGTATTTG GAGGCGAGGT CGGTCGTCAA
AGCGGCCTGA ACTTTCGCCA TAGCGGTTTC TTCAACGGCG TGTCGGACAC CATCGCCGTT
GATCCGAGGA ATCCGGTCTC CTATGTCCCG GTGACGTTCG TAAACACTGC AAAGGACTCG
AACAACACCT ATAATCTTAA CCTTGGCGCG GTCTATGTGC AGGACCAAGT CGAGATAACC
CGCTATCTGC AGTTGATCGG CGGCGTGCGG TTCGATCATT TCGATCTTCA GTCGCGAGAC
AGGCGCACTA ACGTCGTGAT GGGTCGTGTC GACGATCTGG TGTCACCTCG CGCCGGGGTC
ATCTTCAAGC CAATCGATAA TCTTTCGATC TACGGCAGCT ATAGCGTGTC GTATCTGCCG
AGCGCGGGCG ATCAATTCAG CTCGCTCAAT CCCGGGCTGG TGATCGCAGA GCCGGAGAAG
TTCGTGAACA AGGAAGTTGG GGTCAAATAC GACATTCTGC CTCGCCTTCA GTTTGCCGCG
GCATTGTATG ACCTCGATCG GACCAACCAG CGTCTTGCGG ATCCGAACAA TTCTGGCTTC
TTCCTCCTCA GCGGAGCGAC CAAGACTCGC GGCTTCGAGG CGTCACTTGC TGGTTATGTC
ACGGATTCCT GGCAGATTAC CGCAGGGTAT GCCTATACGG ATGCACGGAT CGCAAGCAAT
ACGTCGCCGA CGGTCGTGGC GGGCAACAGG GTGGCGCTGG TGCCGTACAA TACGATTTCC
GTTTGGAACA AATACCAATT CAATCCAATG TGGGCAGCGG CCATCGGGGT GATTCACTAT
TCGAATTTCT TTGCGTCGTC CGACGATACC GTCCGCATTC CGGATTTTAC GCGCGTGGAT
GGTGCAGTCT TCCTGACCTT GAATGAAACA TGGCGTGCTC AGTTGAACAT CGAAAATCTG
TTCGATCGGA AATACTACGC AACGGCTGAC GGAAACAACA ACATCACGCC AGGGTCACCG
CGGGTATTCC GATTGTCGGC TACCGCCAAG TTCTGA
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| Protein sequence | MTNIGSGVER HGWRCLLLST SAAVVLGAGL LLDCTPALAQ QEQSSANPLP PIHVSPPQQR
TRRARSTPNT SRAARPRGRT VVAAPSEKKF PSVSSQDART GQTGYVTQST SSGTRTNTAL
INVPQSISVL TKDFIKDQSF TSIGEATRYV PGVIYHQGES HRDDLVIRGQ RSNADFYTNG
IRDDVQYFRD FYNLQRLEVL KGPNAMIFGR GGGGGVINRV LKEADGTTVR EVTVGGNSYP
GARVTTDIGQ AVNENWAARF NAMYENTESY RDFVNLERWA VNPTVTFAPN DTTTVKLSYE
HLHDRRTVDR GIPSQILPGN ALPRPPYDTS ASTFFGNPNL NYALADVDIG TAVIEHDFEN
GFTVRNATQA ARYDKFYQNI YPGGGANSGA VNVAGTSSNL SAYNNETDRT NLFNQTDLTY
KFDAGITRHT VVFGGEVGRQ SGLNFRHSGF FNGVSDTIAV DPRNPVSYVP VTFVNTAKDS
NNTYNLNLGA VYVQDQVEIT RYLQLIGGVR FDHFDLQSRD RRTNVVMGRV DDLVSPRAGV
IFKPIDNLSI YGSYSVSYLP SAGDQFSSLN PGLVIAEPEK FVNKEVGVKY DILPRLQFAA
ALYDLDRTNQ RLADPNNSGF FLLSGATKTR GFEASLAGYV TDSWQITAGY AYTDARIASN
TSPTVVAGNR VALVPYNTIS VWNKYQFNPM WAAAIGVIHY SNFFASSDDT VRIPDFTRVD
GAVFLTLNET WRAQLNIENL FDRKYYATAD GNNNITPGSP RVFRLSATAK F
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