Gene Nham_3285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3285 
Symbol 
ID4029479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp3620155 
End bp3620805 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content60% 
IMG OID637971697 
Productcytochrome c biogenesis factor 
Protein accessionYP_578479 
Protein GI92118750 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4235] Cytochrome c biogenesis factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.982918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGAAG CACTTATCAA TCAAAAGCAG CCTTCAAGGG GCTGGTTAAG GCTGTACATC 
GCTTCCTCCG TCGCCGGAGT TGCGATCGGT ATAGCCGTCG CGGTTTGGTT CACGCATGTG 
TCGCCGCTCA CCACGCACCA TGTCACCGTT CCGCTGAATA GCGCGGCCAC TACAGCGCCG 
GTGCCGCTCG AAGGTTTGTT CGATTTGCCG AAGCTTGTAG CTGCGACGGA TGCGAGCCGG 
CCCTGGGCGA TCGTAGGTGG TGCATTGCTG CAGGTCGGTC TTGCCCGTTT CAGTGTTCCG 
ATGCTCGAGC GGGCGATTGA GAATGACCCG GACAATAGCG TGCTTCATGT TGCCTTGGGG 
GAAGCGCTCA CGCTGGCGGG TAGCGGTCTG ATTTCAGATC GCGCCAAGGC GGAATTCGAA 
TTCGCGCTCC GGGCCGACCC CAACGATCTG GTCGCACGAT TCTATATGGG GCAGTGGCTG 
CTGCAAAACG GCAAGCCAAA GCCGGCCTTG GTCAAATGGG TGGGCTTGAT GCGCACGGTG 
GGAAGCGATC AGACCTGGAA TGACCGGCTA TGGACGGTGA TGCCGATAGC GGCGCAGGAG 
GTCGGCATCA ACCAGCTTGC GCTGCAAGCT CTCTGTGTCG CGGGGATGTA A
 
Protein sequence
MREALINQKQ PSRGWLRLYI ASSVAGVAIG IAVAVWFTHV SPLTTHHVTV PLNSAATTAP 
VPLEGLFDLP KLVAATDASR PWAIVGGALL QVGLARFSVP MLERAIENDP DNSVLHVALG 
EALTLAGSGL ISDRAKAEFE FALRADPNDL VARFYMGQWL LQNGKPKPAL VKWVGLMRTV 
GSDQTWNDRL WTVMPIAAQE VGINQLALQA LCVAGM