| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3284 |
|---|
| Symbol | |
|---|
| ID | 4029478 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 3618766 |
|---|
| End bp | 3619842 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637971696 |
|---|
| Product | multicopper oxidase, type 3 |
|---|
| Protein accession | YP_578478 |
|---|
| Protein GI | 92118749 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2132] Putative multicopper oxidases |
|---|
| TIGRFAM ID | [TIGR02376] nitrite reductase, copper-containing |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATGTTA TTCCCATGAT CCTGCAACGC TGTGCGCTGC GCGCACCTCT CGTCGCCTCC
ATCTTCGCCG CAAGTGCCGC ATTATGCGTC GCCAGTCCGC CCACGGCATC CGCGGAGACC
CGTCATTTCT CGATGACCGT CGAGGACACG ATCCTCAAGC TGGTCGACAA ACAGACCTTC
CACACCTTCT CCTTTAACAA CCAGACGCCT GGCCCGCTGA TCCATGTGCA GGAGGGCGAT
GATGTCGAGA TCGAAGTCGA AAACAACACG ACGCTGCCGC ACACGATTCA TTGGCACGGC
ATGTTTCAAC GCGGCACCTG GAAAAACGAC GGCGTTCCCG ACACGACGCA GCCGGCGATT
CCGCCCGGCG AGACCTTTAC CTATCGCTTC AAGGCCGAGC CGTCCGGCAC CATGTGGTAC
CACTGTCATG TCAACGTCAA CGAGCATGTC GCCATGCGCG GCATGTGGGG TCCGTTGATC
GTCGATCCGA AGGATCCGCC GCCGGTCGAA AAGGAAGTCA CCAAAGATTA CATCATGATG
TTCTCCAGTT GGTCTTCTGC CTGGGCCAAG AAGCCCGGCT ATGGCGGCAT CCCCGGTGAC
GTGCAGGATT TCTTCACCAT CAACGGCAAG GCTTATCCCG ACACCCAGCC ATTGCGGATC
AAGGAGGGCG ATGTCGTTCG CATCCGCCTG ATCGGCGCCG GTGACGAAAT GCATTCCGTC
CACATCCACG GCCATGACTT CGAGGTCTAT GCCAAGGATG GCCGGCCGCT CGCTAATCCT
TACCTCGCCG ACACAATCCT GTTCGGACCA GGTGAGCGCT ACGACCTGAT TCTGCGCGCC
GACAATCCCG GCATCTGGAT GGTGCACGAT CACATCGACA GGCACACGGT GAACGGCACG
TCGCCGATGG GCGGCATGAT GACCACCATC GAATACGAGG AAATCCCGGT GAAGGAGCAG
GCTTTCTATA AATGGAAAAA CAAAGAGTTC GTGCCCGATT TTTATTATGA AGAATCGATG
AAAAAGCCGT TCGGCATGTA CGAGAGCCCT GCCCTCAAGG GCGATCCCGC GCCCTAA
|
|---|
| Protein sequence | MHVIPMILQR CALRAPLVAS IFAASAALCV ASPPTASAET RHFSMTVEDT ILKLVDKQTF
HTFSFNNQTP GPLIHVQEGD DVEIEVENNT TLPHTIHWHG MFQRGTWKND GVPDTTQPAI
PPGETFTYRF KAEPSGTMWY HCHVNVNEHV AMRGMWGPLI VDPKDPPPVE KEVTKDYIMM
FSSWSSAWAK KPGYGGIPGD VQDFFTINGK AYPDTQPLRI KEGDVVRIRL IGAGDEMHSV
HIHGHDFEVY AKDGRPLANP YLADTILFGP GERYDLILRA DNPGIWMVHD HIDRHTVNGT
SPMGGMMTTI EYEEIPVKEQ AFYKWKNKEF VPDFYYEESM KKPFGMYESP ALKGDPAP
|
|---|
| |