| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3278 |
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| Symbol | |
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| ID | 4029472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3612405 |
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| End bp | 3614024 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637971690 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_578472 |
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| Protein GI | 92118743 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.629429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCGA TCCCGATCAT TTCCTTGCCC GCCGCACTCC GCAGCACGCC TGCGGCACGC
TCCTCTCAGG CGCCGTCGGC GCCGTCGTTC AGAACCTGGA TCGCAGTGTT CGGCGCGACG
CTCGGCGCCT TCATGGCGGT GCTGAACATT CAGATCGTCA ACGCGTCGCT GGCCGACATT
CAGGGCGCGA TCGGCGCCGG CATCGACGAC GGCGGCTGGA TTTCGACCTC TTATCTGATC
GCGGAGATCG TCGTCATTCC ACTGAGCGGC TGGCTGGCGC AGGTCTTTTC CGTTCGCGTC
TACCTGCTGA CCAATGCCGT CCTGTTCCTG GTGCTGTCCG TGGCGTGCGC CTTCGCGCAA
ACCCTGCCGC AGATGATCGT GCTGCGCGCG ATCCAGGGGT TCACCGGCGG CGTGCTGATC
CCGATGGCCT TCACATTGAT CATCACGCTG CTGCCGAAGG TGAAGCAGCC GATCGGGCTG
GCGCTGTTCG CGCTGTCGGC GACCTTTGCG CCGGCGATCG GCCCGACGAT CGGCGGCTAT
CTCACCGAGA ACTGGGGCTG GCAGTTCATT TTCTACGTCA ACCTCGTTCC CGGTCTGTTG
ATGCTGGGCA TGCTCTGGTT CTCGCTGGAT CGCAAGCCGA TGCAACTGTC GTTGCTGCGT
CAGGGTGATT GGGCCGGCAT CGTGACCATG GCTGTCGGCC TTGGCGCGCT GCAAACGGTG
CTCGAAGAAG GCAACAAGGA CGACTGGTTC GGTTCGCCTT TCATCCTCCG GCTGTCGGTG
ATCGCCGCGA TCTCGTTGTC GCTGTTCCTG TGGATCGAAC TGACGGGCGA CAAACCGCTC
TTGAACCTTC GCCTGCTGTT CCGTCGCAAC TTCGGCTTCG GCATTCTCGC CAATTTCCTT
CTGGGCGTTG CGCTCTACGG ATCGGTCTTC ATCCTGCCGG TTTATCTGTC CCGCATTCAG
GGCTACAATG CCGAGCAGAT CGGAATGGTG CTGGCCTGGA CCGGCCTGCC GCAATTGCTG
CTGATTCCGC TGGTGCCGCG ATTGATGAAG CGCTTCGATC CCCGTCTCCT GATCGGGGTC
GGCTTCGCAC TGTTTGCAGC GAGCAACTTC ATGAACATCG ACATGACGGC GGACTATGCC
TCCGATCAAC TGCTGTGGCC CAACGTGGTT CGCGCGGTCG GGCAGGCGTT GATCCTGACG
CCGCTGTCGG TGGTCGCCAC CGCAGGCATC GAGACGGAAA ACGCCGGCTC GGCTTCCGGT
CTGTTCAATA TGATGCGCAA TCTGGGCGGC GCCGTCGGCA TCGCGATCCT GCAAACGTTC
TTGACCAAGC GCGAGCAGTT TCACTCCAAC GTGTTGATGC AGTCGGTCTC GACTTTGGAA
CAGGCGACGC GGACCCGGAT TGAGCTGTTG ACCAACTACT TCATGAACCA CGGTGTCGCC
GATCCAGCGG CCGCTTCACA TCAGGCCGTG GTCGCCATCG GTCGCGTCGT GCAGAAGCAG
GCTTATGTAA TGGCATTCAG CGATACCTTT TTTCTGCTCG GAGCGGCGCT GATCGTCGCG
CTTGCCGCAT CGCTTTTGCT GAGGAAGCCC GCCCATCCCG ATGCGGGCGG CGCGCACTAG
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| Protein sequence | MAAIPIISLP AALRSTPAAR SSQAPSAPSF RTWIAVFGAT LGAFMAVLNI QIVNASLADI
QGAIGAGIDD GGWISTSYLI AEIVVIPLSG WLAQVFSVRV YLLTNAVLFL VLSVACAFAQ
TLPQMIVLRA IQGFTGGVLI PMAFTLIITL LPKVKQPIGL ALFALSATFA PAIGPTIGGY
LTENWGWQFI FYVNLVPGLL MLGMLWFSLD RKPMQLSLLR QGDWAGIVTM AVGLGALQTV
LEEGNKDDWF GSPFILRLSV IAAISLSLFL WIELTGDKPL LNLRLLFRRN FGFGILANFL
LGVALYGSVF ILPVYLSRIQ GYNAEQIGMV LAWTGLPQLL LIPLVPRLMK RFDPRLLIGV
GFALFAASNF MNIDMTADYA SDQLLWPNVV RAVGQALILT PLSVVATAGI ETENAGSASG
LFNMMRNLGG AVGIAILQTF LTKREQFHSN VLMQSVSTLE QATRTRIELL TNYFMNHGVA
DPAAASHQAV VAIGRVVQKQ AYVMAFSDTF FLLGAALIVA LAASLLLRKP AHPDAGGAH
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