Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3277 |
Symbol | |
ID | 4029471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 3611914 |
End bp | 3612372 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637971689 |
Product | alkylhydroperoxidase AhpD core |
Protein accession | YP_578471 |
Protein GI | 92118742 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.880683 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCCA GATTGAATCC GTATCAAGCC GCGCCTCAGA CCATGAAGGC GCTTCAGGCG CTCGAGACGC AGCTTCAGGC CAGCGGGCTC GAGAAGCCGC TGATCGAACT GGTCAAGACC CGGGCGTCAC AGATCAACGG TTGTGCGTTT TGCATCGACA TGCACACCCA GGACGCACGC AAGCAGGGCG AGACCGAACA ACGGCTCTAT CTGCTCAACG CCTGGCGCGA GTCGCCGCTC TACACGGATC GCGAGCGCGC GGCACTGGCC TGGACCGAGG CTGTGACGCT GGTGTCGGAA ACCCATGTGC CGGACGACGT TTACGACGAC GTTCGCCGTC ACTTCTCCGA AGCCGAAACG GTCAATCTGA CCATGCTGGT CGCGGCGATC AACGCGTGGA ATCGCATTGC CATCAGTTTC CGGTCCATTC ATCCGGTCAA GGCCGCTCAC GCCGCATGA
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Protein sequence | MKARLNPYQA APQTMKALQA LETQLQASGL EKPLIELVKT RASQINGCAF CIDMHTQDAR KQGETEQRLY LLNAWRESPL YTDRERAALA WTEAVTLVSE THVPDDVYDD VRRHFSEAET VNLTMLVAAI NAWNRIAISF RSIHPVKAAH AA
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