Gene Nham_3277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3277 
Symbol 
ID4029471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3611914 
End bp3612372 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content61% 
IMG OID637971689 
Productalkylhydroperoxidase AhpD core 
Protein accessionYP_578471 
Protein GI92118742 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.880683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCA GATTGAATCC GTATCAAGCC GCGCCTCAGA CCATGAAGGC GCTTCAGGCG 
CTCGAGACGC AGCTTCAGGC CAGCGGGCTC GAGAAGCCGC TGATCGAACT GGTCAAGACC
CGGGCGTCAC AGATCAACGG TTGTGCGTTT TGCATCGACA TGCACACCCA GGACGCACGC
AAGCAGGGCG AGACCGAACA ACGGCTCTAT CTGCTCAACG CCTGGCGCGA GTCGCCGCTC
TACACGGATC GCGAGCGCGC GGCACTGGCC TGGACCGAGG CTGTGACGCT GGTGTCGGAA
ACCCATGTGC CGGACGACGT TTACGACGAC GTTCGCCGTC ACTTCTCCGA AGCCGAAACG
GTCAATCTGA CCATGCTGGT CGCGGCGATC AACGCGTGGA ATCGCATTGC CATCAGTTTC
CGGTCCATTC ATCCGGTCAA GGCCGCTCAC GCCGCATGA
 
Protein sequence
MKARLNPYQA APQTMKALQA LETQLQASGL EKPLIELVKT RASQINGCAF CIDMHTQDAR 
KQGETEQRLY LLNAWRESPL YTDRERAALA WTEAVTLVSE THVPDDVYDD VRRHFSEAET
VNLTMLVAAI NAWNRIAISF RSIHPVKAAH AA