Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3274 |
Symbol | |
ID | 4029468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 3606694 |
End bp | 3607497 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637971686 |
Product | Cof protein |
Protein accession | YP_578468 |
Protein GI | 92118739 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCCTA TCTCCCTTGT GATCTCCGAT GTCGACGGCA GTCTGGTGAC GCCCGACAAG CGACTGACGG AGGCCGCGAT CAAGGCCGTG AAAGACCTCG CCGACAGGGA TATCGGCTTC ACGATCACCA GCAGCCGTCC CGCGTTCGGA ATGCGGATGC TGATCGAACC GCTCGGTCTC AAGCTACCGT TCGGCGCCTT CAACGGCAGC CTGATCGTCG ATCCTGCCCT CAACGTGCTT CAAAGGACCG TCATTTCCGC GTCGGCGGCG CGGATCGCGA TCGACACGCT GAAGGCATCA GGGGTCGACA TCTGGCTGTT CACGGCCGAC CGCTGGCTGA TCACGCACGA CGACGGGCGC TACGTCCCGC ACGAGCAGGC CACGATCCTG GCCGACGCCG TTATCGTTTC AAGCTTTGAT GATTTCGTGA ACGAGGCCTG CAAGATCGTC GGCGTCAGCG CCGATCCCGA GAAGCTCGCG CGTTGCGAGA TCGCAATGCA GGCGGCGCTC GCCGGGCAAG CGTCGGCTAT CTGCTCGCAA AGCTATTATC TCGACATCAC GCCCGCCGGG CAGGACAAGG GGACATTCGT GGAAACGATG GCGAAGCGCC TCGGTATCGC GCCGCGCAAC ATCGCCACCA TCGGAGACAT GCAAAACGAT CTGGCCATGT TCGGCAAAAG CGGCCTGTCC TTTGCCATGG GCAATGCCAA CGACGAGGTG AAGGCGCAAG CCACCTGCGT CACCGACAGC AATGAAAACG ATGGTTTCGC CAAGGCGGTC GACCGGATTA TCGGCCTCGG ATAA
|
Protein sequence | MNPISLVISD VDGSLVTPDK RLTEAAIKAV KDLADRDIGF TITSSRPAFG MRMLIEPLGL KLPFGAFNGS LIVDPALNVL QRTVISASAA RIAIDTLKAS GVDIWLFTAD RWLITHDDGR YVPHEQATIL ADAVIVSSFD DFVNEACKIV GVSADPEKLA RCEIAMQAAL AGQASAICSQ SYYLDITPAG QDKGTFVETM AKRLGIAPRN IATIGDMQND LAMFGKSGLS FAMGNANDEV KAQATCVTDS NENDGFAKAV DRIIGLG
|
| |