Gene Nham_3274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3274 
Symbol 
ID4029468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3606694 
End bp3607497 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content61% 
IMG OID637971686 
ProductCof protein 
Protein accessionYP_578468 
Protein GI92118739 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCTA TCTCCCTTGT GATCTCCGAT GTCGACGGCA GTCTGGTGAC GCCCGACAAG 
CGACTGACGG AGGCCGCGAT CAAGGCCGTG AAAGACCTCG CCGACAGGGA TATCGGCTTC
ACGATCACCA GCAGCCGTCC CGCGTTCGGA ATGCGGATGC TGATCGAACC GCTCGGTCTC
AAGCTACCGT TCGGCGCCTT CAACGGCAGC CTGATCGTCG ATCCTGCCCT CAACGTGCTT
CAAAGGACCG TCATTTCCGC GTCGGCGGCG CGGATCGCGA TCGACACGCT GAAGGCATCA
GGGGTCGACA TCTGGCTGTT CACGGCCGAC CGCTGGCTGA TCACGCACGA CGACGGGCGC
TACGTCCCGC ACGAGCAGGC CACGATCCTG GCCGACGCCG TTATCGTTTC AAGCTTTGAT
GATTTCGTGA ACGAGGCCTG CAAGATCGTC GGCGTCAGCG CCGATCCCGA GAAGCTCGCG
CGTTGCGAGA TCGCAATGCA GGCGGCGCTC GCCGGGCAAG CGTCGGCTAT CTGCTCGCAA
AGCTATTATC TCGACATCAC GCCCGCCGGG CAGGACAAGG GGACATTCGT GGAAACGATG
GCGAAGCGCC TCGGTATCGC GCCGCGCAAC ATCGCCACCA TCGGAGACAT GCAAAACGAT
CTGGCCATGT TCGGCAAAAG CGGCCTGTCC TTTGCCATGG GCAATGCCAA CGACGAGGTG
AAGGCGCAAG CCACCTGCGT CACCGACAGC AATGAAAACG ATGGTTTCGC CAAGGCGGTC
GACCGGATTA TCGGCCTCGG ATAA
 
Protein sequence
MNPISLVISD VDGSLVTPDK RLTEAAIKAV KDLADRDIGF TITSSRPAFG MRMLIEPLGL 
KLPFGAFNGS LIVDPALNVL QRTVISASAA RIAIDTLKAS GVDIWLFTAD RWLITHDDGR
YVPHEQATIL ADAVIVSSFD DFVNEACKIV GVSADPEKLA RCEIAMQAAL AGQASAICSQ
SYYLDITPAG QDKGTFVETM AKRLGIAPRN IATIGDMQND LAMFGKSGLS FAMGNANDEV
KAQATCVTDS NENDGFAKAV DRIIGLG