Gene Nham_3254 details

Gene Information

• Locus tag: Nham_3254
• ID: 4029715
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 3586472
• End bp: 3588535
• Gene Length: 2064 bp
• Protein Length: 687 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637971667
• Product: hypothetical protein
• Protein accession: YP_578449
• Protein GI: 92118720

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCTACG GCATCGCCTT CGCTCCGCTG GTTCCCGTGG TCGTGCTGTG GACCGCGCTC 
GCTGCGATCG TCGTGATCGC GGTGCTGCTC GTGGTCGGCC GCGCGCGGGG CGCGGCGGTG 
CGGGTGGCGG CGCTGGCGCT GATCCTGCTC GCGCTCGCCA ACCCGTCGTT CACCCGCGAG 
GAGCGCGAAC CGCTGTCCTC GGTGGCCGCC GTCATCGTCG ACAAGAGCCC GAGCCAGAAT 
TTCGGCGACC GCACCGACCA GACAGCGAAG GCGCGCGAGG CGCTGGTCGA CCGCCTCAAG 
CAGATCAAGG GCCTTGAAGT CCGCGTCGTC GATGCCGGCC AGGCGGACGG CGAGACCGAC 
GGCACGAAGC TGTTCTCGGC GCTTTCCTCG ACCCTGTCCG ACGTGCCGAC CGACCGCGTC 
GCCGGCGCGT TCCTGATCAC CGACGGGCGC GTTCACGATA TTCCGGACAA CGTCGCCGCC 
CTCGGATTCA AGGCGCCGGT CCATGCTCTG ATCACCGGCC ACAACGACGA ACGCGACCGC 
CGCGTCGCGA TCGTCGCAGC ACCCCGTTTC GGCATCGTCG GCCAGACCCA GACCATCACC 
TACCGGCTCG ACGATCAGGG CGTCAGCGGC GAGCACGCGA AAGTGGTCGT GCGCCGCGAC 
GGCGAGGTCA TCAACGAGCG CACGGTGCTG AGCGGGGAGA CCGTCAACGT CGATGTCGAC 
ATCAAGCACG CCGGGCAGAA CATCGTCGAG ATCGAGGCCT CGCCGCTAAC GAACGAACTG 
ACGCCGGTCA ACAATCGCGC CGTGGTGCCG ATCGACGGCG TCCGCGACAA GCTGCGCGTG 
CTGCTGGTAT CGGGCGAGCC GCATTCGGGC GAACGCACCT GGCGCAACCT CTTGAAGTCG 
GACCCCAGCG TCGATCTGGT TCACTTCACG ATCCTGCGTC CGCCCGAGAA GCAGGACGGC 
ACGCCGCTCA ACGAACTGTC GCTGATCGCC TTCCCGACCC GCGAGCTGTT CCAGCAGAAG 
ATCAACGAAT TCCAGCTCAT CATCTTCGAC CGCTACGCCC GCCAGGGCGT GCTGCCGATC 
GCCTATTTCG ACAATATCGC GCGTTACGTG CGCGCAGGCG GCGCGGTGCT GGTCTCGGCC 
GGCCCCGACT ACGCCTCGAC CACCAGCATC TGGCGGACGC CGCTGGATTC GGTGCTGCCC 
GCCGAACCGG CCGGCGTCAC CGACAAGCCG TTCCACGCGC GCCTGAGCGA GGCCGGCAAG 
CGCCACCCGG TCACCCGCGG GCTTGAAGGC TCCGCGAGCG ACCCGCCGCA CTGGAGCCGG 
TTTTTCCGCG AGGTCGACAC CCGCAACGCT TCGGTGCCGC CAGTCATGAC CGGCGCCGAC 
GGCGAGCCGC TGCTGTTGCT GTCGCGTTAT GACGAAGGCC GCGTCGCGCT GCTGCTGTCG 
GATCACATCT GGCTGTGGGC GCGCGGCTAC GAGGGCGGCG GCCCGTATCT CGACCTGCTG 
CGGCGGATGT CGCACTGGCT GATGAAACAG CCCGAACTCG ACGAAGAGGC GCTGCGGCTC 
GAAGTCCACG GCAAGGACCT CGTCGTGCAG CGCCAGACCA TGGCCGACAG CGTCACGCCG 
GTCGTCGTGA CGTCGCCGTC CGGCAAGACC CGCGAACTGA CGCTCGGCGC CAGCGAACCC 
GGCCTCTGGA AAGCGACGCT GACCGCCGAC GAACTCGGAT TATGGCAGGC GAGCGATGGC 
ACGCTGAAAG CGCTGGTCAA TGTCGGCCCG GTCAATCCGA AGGAATTCTC CGAGGTGACG 
TCGACCGTCG ACGAACTCAA GCCGCTCGCG CAGGCCAGCG GCGGCGATGC CCGGCGGATC 
GCGGACGGCT CGAACGTCGA CGTTCCGCGC ATTGTTCCGG TGCATTCCTC CAGCGTGTTT 
CGCGGCGACG GCTGGATGGG CGTGCGGATG CGCGACGCCA GCGTGGTGCG CGGCGTCGGC 
GTTCTGCCGG TGTTCGCCGG GCTGATCGGC CTGTTGCTGC TGCTCGGCGC CTTTGCCGCG 
ACCTGGCTGC GCGAGGGACG CTAG 

 

Protein sequence

MTYGIAFAPL VPVVVLWTAL AAIVVIAVLL VVGRARGAAV RVAALALILL ALANPSFTRE 
EREPLSSVAA VIVDKSPSQN FGDRTDQTAK AREALVDRLK QIKGLEVRVV DAGQADGETD 
GTKLFSALSS TLSDVPTDRV AGAFLITDGR VHDIPDNVAA LGFKAPVHAL ITGHNDERDR 
RVAIVAAPRF GIVGQTQTIT YRLDDQGVSG EHAKVVVRRD GEVINERTVL SGETVNVDVD 
IKHAGQNIVE IEASPLTNEL TPVNNRAVVP IDGVRDKLRV LLVSGEPHSG ERTWRNLLKS 
DPSVDLVHFT ILRPPEKQDG TPLNELSLIA FPTRELFQQK INEFQLIIFD RYARQGVLPI 
AYFDNIARYV RAGGAVLVSA GPDYASTTSI WRTPLDSVLP AEPAGVTDKP FHARLSEAGK 
RHPVTRGLEG SASDPPHWSR FFREVDTRNA SVPPVMTGAD GEPLLLLSRY DEGRVALLLS 
DHIWLWARGY EGGGPYLDLL RRMSHWLMKQ PELDEEALRL EVHGKDLVVQ RQTMADSVTP 
VVVTSPSGKT RELTLGASEP GLWKATLTAD ELGLWQASDG TLKALVNVGP VNPKEFSEVT 
STVDELKPLA QASGGDARRI ADGSNVDVPR IVPVHSSSVF RGDGWMGVRM RDASVVRGVG 
VLPVFAGLIG LLLLLGAFAA TWLREGR