Gene Nham_3252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3252 
Symbol 
ID4029713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3582589 
End bp3583530 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content68% 
IMG OID637971665 
Producthypothetical protein 
Protein accessionYP_578447 
Protein GI92118718 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.122615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGCGG CGGCCGAGCG TGCCAGGCAG GAAATCGAAG CTGTCAGACG TGCCGATGGT 
GAAAGCCGCA CGCTGGCGGC ATCGTTGCCG CGTCTCGTGC TGGAAGCCCG CCGCATCGCC
GCCAACGTGA TTCACGGCCT GCATGGCCGC CGCCGCGCCG GCTCGGGAGA AAGCTTCTGG
CAATACCGCC GTTTCGTATC CGGCGAACCG TCGCAGAATG TCGACTGGCG TCGCTCCGCG
CGCGACGATC ATCTCTACGT CCGCGAGCAC GAGTGGGAGG CCGCGCACAC CGTGTGGGTC
TGGCCCGACC GCTCGGCGTC GATGGCCTTC GCCTCCCGAC AGGCGCGTGA CAGCAAGCTC
GAGCGCGCTT TGATCGTGAC CTTCGCGCTG GCCGAATTGC TGGTGGCCGG CGGCGAACGC
GTCGGCGTTC CCGGGTTGAT GAACCCAACC GCGAACCGCA ACGTCATCGA CAGGATGGCG
CAGGCGATGC TGCACGATGA TCTTGCGCGC GCCAGCCTGC CGCCGTCGTT CGTACCGCCG
GCGCGATCGC AGATCGTGGT GCTGTCGGAC TTCTGGTCGC CGATCGCGGA GATAACCACC
ATGCTCGCCG GGCTGTCGGC GTCCGGCGCG CACGGCACGT TGCTGCAGGT GGTCGATCCC
GCCGAGGAGA CGTTCCCCTA TTCGGGCCGC GTCGAGTTCG TCGAACCAGA GGACGGCAGC
GTGATCACCG CGGGCCGCGC CGAACGATGG GCCCGCGACT ACGTGGCCCG CGTCGCGCTG
CATCGCGACC AGATCCGCAG CGAGACCAAG ACGCTCGACT GGCTGTTCTC GACCCACACC
ACCGACCGCT CCGCAGCCGA ACTGCTGCTG TTCCTCCACG GCGGCATGAT GGCGAGCAAG
GGCGGCGGTT CCACGTCGGT CAAAGCGGAG CACACCGCAT GA
 
Protein sequence
MVAAAERARQ EIEAVRRADG ESRTLAASLP RLVLEARRIA ANVIHGLHGR RRAGSGESFW 
QYRRFVSGEP SQNVDWRRSA RDDHLYVREH EWEAAHTVWV WPDRSASMAF ASRQARDSKL
ERALIVTFAL AELLVAGGER VGVPGLMNPT ANRNVIDRMA QAMLHDDLAR ASLPPSFVPP
ARSQIVVLSD FWSPIAEITT MLAGLSASGA HGTLLQVVDP AEETFPYSGR VEFVEPEDGS
VITAGRAERW ARDYVARVAL HRDQIRSETK TLDWLFSTHT TDRSAAELLL FLHGGMMASK
GGGSTSVKAE HTA