Gene Nham_3249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3249 
Symbol 
ID4031911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp3579931 
End bp3580596 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content65% 
IMG OID637971662 
ProductNUDIX hydrolase 
Protein accessionYP_578444 
Protein GI92118715 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAGA AAGGCGCCGC GACCACCGAT GCCGGCACCG AGGATTTTTT CGACCGTGCG 
CGGGCGCGGC TGCGATTCGA CATCCCCCCG GGGCTGACCG ACGCCGGCAT CGCTCCGTCG 
ACTGGCGATC AGGGCCGCGA TTTCATACTC CAGGAGACCG CCCGGGAAGA GCCGATGCGG 
GCGGCGGCGG TACTGATCGC GGTGGTGGCG CGCGACGAGC CGACTGTGTT GCTGACAAAG 
CGATCGGCCC GTGTCAGCGA CCACGCCGGC GAGATCGCAT TTCCCGGCGG CAAGATCGAG 
GCGACCGACG CCTCGCCGGT CGACGCGGCG TTGCGCGAGG CGTGGGAAGA AGTCGGGCTG 
CCTCGCGACT TCGTCGAGCC GATCGGGTAT CTCGATCTCT ACGGCACGAG TTTTGGCTAC 
CGTGTCCTGC CCACGGTGGC GCGAGTGAGG CCGGGGTTCG ACCTTCATAT CAATGCGGGT 
GAAGTGGAAG AGGCATTCGA GGTGCCGCTG TCGTTTCTGA TGAACCCGGA CAACCACAAA 
CAGGGTTGGA AGCTGGCCCG CGGCAGGATG CGCTCGTTCT ACGAGATGCC GTTCGAGGAA 
CGTTATATCT GGGGCGCGAC CGCCGGGATC CTGCGCGTGC TGTACGAGCG AGTCTATCTC 
AAATGA
 
Protein sequence
MEKKGAATTD AGTEDFFDRA RARLRFDIPP GLTDAGIAPS TGDQGRDFIL QETAREEPMR 
AAAVLIAVVA RDEPTVLLTK RSARVSDHAG EIAFPGGKIE ATDASPVDAA LREAWEEVGL 
PRDFVEPIGY LDLYGTSFGY RVLPTVARVR PGFDLHINAG EVEEAFEVPL SFLMNPDNHK 
QGWKLARGRM RSFYEMPFEE RYIWGATAGI LRVLYERVYL K