Gene Nham_3247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3247 
Symbol 
ID4031909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3578418 
End bp3579674 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content70% 
IMG OID637971660 
Productpolynucleotide adenylyltransferase region 
Protein accessionYP_578442 
Protein GI92118713 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCACGG CCTGCTCGCT AAGCGAAGCG GGCTGGCTGA AATCGGGTCC TGCGGTGCGC 
GTTCTCGCGC TGCTCGGTGG AAACGGCGAG GAGGCGCGCG TCGTCGGCGG CGCGGTGCGC
AACGCCCTGA TGGGCCTGCC GGTCGGCGAG ATCGACATCG CAACCACGGC GCTGCCCGAG
GAGGTGATCC GCCGCGCGGC CGCCGCCCGC ATCAAGAGCA TTCCGACCGG TATCGAGCAC
GGCACCGTCA CACTGGTCGT CGATGGCCGG CCATTCGAGA TCACGACGCT GCGCGAGGAC
GTCGAGACTT TCGGCCGCAA GGCCAGGGTC GCGTTCGGCC GCGACTGGGC GCGCGATGCC
GAGCGCCGCG ATTTCACCAT CAACGGCCTG TCGGTCGGCA GCGATGGCAC GGTGCACGAC
CATGTCGGCG GACTCGACGA CATCGCGGCG AGGCGCGTGC GCTTCATCGG CGATCCGGAC
CGGCGCATCG CCGAGGATTA CCTGCGTATT CTCCGCTTCT TCCGCATCCA CGCCGCCTAT
GGCGCAGGCG AACCCGACCG GGCCGGCTAT CTCGCCTGCA TCCGCGGTCG CGCCGGACTT
GCCACGCTGT CGGCCGAACG ATTGCGGGCG GAGATGCTGA AGCTGCTGGT CGCGGAGGGA
GCCGTGGAGG CGCTGGTCGC GATGGAGGAT GGCGGGCTGC TACTGGCCAT TCTCGGCGGC
GTCGCCTATC GCGGGCCGCT CGCGGCGATG ATCGCCGCCG AGCGCGCGCT GGGGCTCGCG
CCGGATCCGA TTCGCCGGCT CGCGGCGCTT GCGGTATCGG TCACCGAAGA CGCGCGGCGG
GTCGCGCAGC GTTTACGGCT CTCCAATGCC GAGGCCAAGC AACTGGATTC GATGGGCCAC
CGCTGGTGGC GGCTCGGCAG CATGGACGAG GCCACCGCGC GGCGGCGGCT GTACCGGCTA
GGAGCGCCGC GCTTCCGCGA CCGGCTGATG CAGGCCTGGG CGCGGGCGGG CCTCGGCGCG
GATCCGGGGC TGTGGCTAAA CGTCGCAACC CTGCCGCAGC GCTGGCAGCC GCCGGCGTTT
CCATTGAAGG CGGAGGACTT CGTCGGCCGC GGAATAGCGG CAGGTCCGGC GCTCGGACAT
GTTCTGACGA TTGCGGAAGA TGCCTGGCTT GCGGCGGATT TCCCGCTCGA TTCCGCGCAG
CTCTCGGCGA TTGCGGATCA GACCGTCGCG CGTTTCACGC GCGATCACCG GTTGTGA
 
Protein sequence
MTTACSLSEA GWLKSGPAVR VLALLGGNGE EARVVGGAVR NALMGLPVGE IDIATTALPE 
EVIRRAAAAR IKSIPTGIEH GTVTLVVDGR PFEITTLRED VETFGRKARV AFGRDWARDA
ERRDFTINGL SVGSDGTVHD HVGGLDDIAA RRVRFIGDPD RRIAEDYLRI LRFFRIHAAY
GAGEPDRAGY LACIRGRAGL ATLSAERLRA EMLKLLVAEG AVEALVAMED GGLLLAILGG
VAYRGPLAAM IAAERALGLA PDPIRRLAAL AVSVTEDARR VAQRLRLSNA EAKQLDSMGH
RWWRLGSMDE ATARRRLYRL GAPRFRDRLM QAWARAGLGA DPGLWLNVAT LPQRWQPPAF
PLKAEDFVGR GIAAGPALGH VLTIAEDAWL AADFPLDSAQ LSAIADQTVA RFTRDHRL