Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3240 |
Symbol | |
ID | 4031902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 3572001 |
End bp | 3574067 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637971653 |
Product | cytochrome c1 |
Protein accession | YP_578435 |
Protein GI | 92118706 |
COG category | [C] Energy production and conversion |
COG ID | [COG1290] Cytochrome b subunit of the bc complex [COG2857] Cytochrome c1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGAC CATCCAGCTT CCAGCCGCAA AATCCCGTCA TCAAATGGAT CGAGCGGCGC TTGCCGATCT TCGGCCTCGT GCATTCCTCG TTCGTCGCCT ATCCGACGCC GCGCAACCTG AACTACTGGT GGACGTTCGG CGGCATCCTC TCCTTCATGC TTGCCGTGCA GATCGTAACC GGCGTGATCC TGGCGATGCA CTACACGCCG GAAGCGACCA TGGCCTTCAA TTCGGTCGAA GCCATCGTCC GCGACGTCGA CTACGGCTGG CTGTTGCGTT ATCTCCATTC GAACGGCGCC TCGATGTTCT TCATCGCCGT TTATGTCCAC ATGCTTCGCG GCCTGTATTA CGGCTCCTAC AAGGAACCGC GCGAGGTCCT CTGGATCCTC GGCGTCATCA TCTACCTGTT GATGATGGCG ACCGGCTTCA TGGGCTACGT GCTGCCGTGG GGTCAGATGA GTTTCTGGGG CGCGACCGTC ATCACCAACC TGTTCTCCGC CATTCCCTAT TTCGGCGAGA GCATCGTGAC CCTGCTGTGG GGCGGCTATT CGGTCGGCAA TCCGACGCTC AATCGCTTCT TCTCGCTGCA CTACCTGCTG CCGTTCGTGA TCGCGGGCGT GGTTGTGCTG CACGTCTGGG CGCTGCATGT CGCCGGTCAG AACAATCCGG CCGGCGTCGA GCCCAAGACC GCGAAGGATA CGGTGCCGTT CACACCTTAC GCGACCACCA AGGATGCATT CGGCCTGTCC TGCTTCATCC TGTTCTATTG CTGGTTCGTC TTCTACATCC CGAACTATCT CGGAGATCCC GACAACTACA TCCCGGCCAA CCCGGGCGTG ACGCCCGCGC ACATCGTGCC GGAATGGTAC TATCTGCCGT TCTACGCGAT CCTGCGCTCG ATCCCGAACA AGCTCGCGGG CGTGGTGGCG ATGTTCAGCG CCATTCTGGT TCTGGCCTTC CTGCCCTGGC TCGATTCCGC CAAGACCCGC TCGGTGCGTT ATCGTCCGCT CGCCAAGCAG TTCTTCTGGA TTTTTGTCGC GGTCTGTCTC GGCCTCGGCT ATCTGGGCGC GCAGCCGCCG GAAGGCATTT ATGTGATCGT CGGGCGCATC CTGACGGTGT GCTACTTCGC CTATTTCCTG ATCGTGCTGC CGACCCTGAG CCGCATCGAG AAGCCTCGCA CTGTTCCCAA TTCGATCGCC GACGACGTGT TGGGGAAGAA ACGCTATGTG GCCTCGGCCT TGGCGGTGCT CGCGGCCGTC GGATTGCTGG CGCTGGATAG CGGCTCGACG GCGCGGGCGG CGGAGGGGCA TGGCCCGCCG GCTCCGTCCT CGCTGAGCTG GTCGTTCGCG GGCCCGTTCG GAAAATTCGA TCAGGGCCAG CTGCAGCGCG GCTACAAGGT CTACAAGGAC GTCTGTGCGT CCTGCCATTC GATGAACCTG CTGCACTATC GCAACCTGGC CGATCCCGGC GGTCCGGGCT TTTCCATCGC CCAGGCCGAA GCGCTGGCTT CCGAGATCCA GGTGAAGGAC GGTCCCAACG ACGCCGGCGA CATGTTCGAG CGGCCGGGAC GTCTCGCCGA CAGGCTTCCG GCGCCGTTTC CAAACGAGAA CGCCGCTCGC GCGGCCAACG GCGGTGCGGC TCCGCCCGAT CTTTCCCTGA TGGCCAAGGC GCGCGGCTAC GAGCGCGGCT TCCCGCAGTT CATCTTCGAT GCCTTTACCC AGTTCCAGGA AAAAGGCCCG AATTACATCT ATGCACTCCT GACCGGTTTC AAGGACGAGC CGCCCAAAGG GTTCGCGCTG CCGGAGGGCT CGTTCTACAA CCAGTACTTC CCGGGCCATG CCATCAAGAT GCCGAACCCG CTGTCGGACG ACCAGGTGAC GTATGACGAC GGGACGCCGC AGAAGGTCGA TCAATATGCG AAGGACGTGT CCGCCTTCCT GATGTGGGCC GCCGAGCCGA AGCTGGAGGA GCGCAAGCGG ATCGGTCTGC AGGTCATGAT TTTCATGCTC GTGTTTGCCG GGCTGCTCTA CTTCACCAAG AAGGCGGTCT GGGCCGACGC GCATTGA
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Protein sequence | MSGPSSFQPQ NPVIKWIERR LPIFGLVHSS FVAYPTPRNL NYWWTFGGIL SFMLAVQIVT GVILAMHYTP EATMAFNSVE AIVRDVDYGW LLRYLHSNGA SMFFIAVYVH MLRGLYYGSY KEPREVLWIL GVIIYLLMMA TGFMGYVLPW GQMSFWGATV ITNLFSAIPY FGESIVTLLW GGYSVGNPTL NRFFSLHYLL PFVIAGVVVL HVWALHVAGQ NNPAGVEPKT AKDTVPFTPY ATTKDAFGLS CFILFYCWFV FYIPNYLGDP DNYIPANPGV TPAHIVPEWY YLPFYAILRS IPNKLAGVVA MFSAILVLAF LPWLDSAKTR SVRYRPLAKQ FFWIFVAVCL GLGYLGAQPP EGIYVIVGRI LTVCYFAYFL IVLPTLSRIE KPRTVPNSIA DDVLGKKRYV ASALAVLAAV GLLALDSGST ARAAEGHGPP APSSLSWSFA GPFGKFDQGQ LQRGYKVYKD VCASCHSMNL LHYRNLADPG GPGFSIAQAE ALASEIQVKD GPNDAGDMFE RPGRLADRLP APFPNENAAR AANGGAAPPD LSLMAKARGY ERGFPQFIFD AFTQFQEKGP NYIYALLTGF KDEPPKGFAL PEGSFYNQYF PGHAIKMPNP LSDDQVTYDD GTPQKVDQYA KDVSAFLMWA AEPKLEERKR IGLQVMIFML VFAGLLYFTK KAVWADAH
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