Gene Nham_3229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3229 
Symbol 
ID4032008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp3558195 
End bp3558857 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content62% 
IMG OID637971642 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_578424 
Protein GI92118695 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.812734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCATCA CGCGCCGCGC TTTTAACGCC GCCCTCTCGC TGAGCGGGCT CGCCGCCTTC 
GCAACTCTTT CGCCCTGGCG CCTGATCGGC GAGGCCATGG CCCAGAGCGC CACCGCCGCG 
GAGGTTGCCA AACCGGTCTC ACTGCCGGAC ATGGCGCTCG GTCCCAAGGA CGCCGCCGTT 
ACCATCACCG AATACGCCTC GATGACATGC CCGCACTGCG CGCGCTTTGC GGAAGACGTG 
TTCCCGAAAA TCAAGGCGGC CTATATCGAC ACCAACAAGA TCCGCTACGT ATTCCGCGAA 
TTCCCGCTCG ACCTCAAGGC CGCCGCCGGC TCGATGCTGG CCCGCTGCAT CGCCAAGGAC 
GACGCCGGGA AATATTTCGC CATCATCAAC GCGCTGTTCA AGTCGCAGGA TGAATGGGCC 
GGGCCCAAGA CCACGGAATC GCTGAAGCTG ATCGGCAAGC AGGCCGGCCT CAGCGGACCG 
GAGGTCGAAA CCTGCCTGAA GGATCAGGCC CTGCTCGACA AGATCGCGGC CGACCAGAAG 
TACGCCAACG AGGTTTTGAA GGTGAACTCG ACGCCGACGT TCTTCATCAA CGGCGAGATG 
GTGAAGGGCG AGGTCTCGTT CGAGGACCTC AAAAAGAAGA TTGATCCCCT GCTGAAGAGC 
TGA
 
Protein sequence
MIITRRAFNA ALSLSGLAAF ATLSPWRLIG EAMAQSATAA EVAKPVSLPD MALGPKDAAV 
TITEYASMTC PHCARFAEDV FPKIKAAYID TNKIRYVFRE FPLDLKAAAG SMLARCIAKD 
DAGKYFAIIN ALFKSQDEWA GPKTTESLKL IGKQAGLSGP EVETCLKDQA LLDKIAADQK 
YANEVLKVNS TPTFFINGEM VKGEVSFEDL KKKIDPLLKS