Gene Nham_3228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3228 
Symbol 
ID4032007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3557609 
End bp3558088 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content67% 
IMG OID637971641 
Producthypothetical protein 
Protein accessionYP_578423 
Protein GI92118694 
COG category[S] Function unknown 
COG ID[COG5389] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAAGC CCGGCCCCCT CTCGGCCAAG CCGCTCTCCA CGCTGCTCGG CGATGTCTTC 
TCCGATGCCT ATGCGCGGCA GGGATTTGCG TCGCGCGAAC TGGTGACGCG CTGGGCGGAG
ATCGCGGGAC CCGAGATCGC CGCGCATTCC GAACCGATGA AAATCCAGTG GCCTCGCCCC
GTCGACGGGC AGCCGCGGGA GCCGGCGACG CTGGTGCTGC GGGTCGAAGG CCCGGTGGCG
CTGGAGATCC AGCACACCTC CGATGTCATC CTGCAGCGGG TCAACCGCTT CTTCGGCTGG
AACGCGGTCG GCCGATTGGC CTTGCGGCAA GCGCCCCTGT CGCGCAAGAC CTTGCGAAGG
ACCGCTAGTT CACCGAGCGA AACGGATGTC GCCAGGGTCG CCGAAACGCT GTCATCGATC
GGGGACGACG ATCTGCGCAC CACGCTGGCG CGACTCGGCG CCTCGATCAA GCGAAATTGA
 
Protein sequence
MSKPGPLSAK PLSTLLGDVF SDAYARQGFA SRELVTRWAE IAGPEIAAHS EPMKIQWPRP 
VDGQPREPAT LVLRVEGPVA LEIQHTSDVI LQRVNRFFGW NAVGRLALRQ APLSRKTLRR
TASSPSETDV ARVAETLSSI GDDDLRTTLA RLGASIKRN