| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3217 |
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| Symbol | |
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| ID | 4031996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3543601 |
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| End bp | 3545382 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637971630 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_578412 |
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| Protein GI | 92118683 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.7268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGTCCA TTCGTTTCAA TCGCCTGGCG ATGGCCGTTG CCGCCGCGAC GTCGTTGGTG
CTGTCCGGCC CGCTGGCAGC ACAGACGCCG GATCATCCGA CCGACACCGC GCAGTTTCCC
AGCGCTCACG ATTTGCGCAC CATGACGAGG GCGGGCAGCT ATCTCGCCGC GCGCCATGCC
AGCGTGGAGC GCGACGCCAA GTCCGCGGCG GCGTTCTATC GTTCGGCGCT GCGCACCGAT
CCGAAAAACA ACGAGCTTCT GGATCGCGCG TTCATCTCGT CGCTGGCCGA GGGCGAGATT
GCCGACGCCG TGAAACTCGC CGACCGCATT CTGACCATCG ACAAATCCAA TCGCGTCGCG
CGGCTGGTCA TCGGCGTCCA TAATCTCAAG TTGAAGAAGT ACGCCGCCGC CCGGAAGAAC
ATCAATCAAT CCGTCCGCGG GCCGATCACC GATCTGGTGG CGACGTTGCT GTCGGGCTGG
GCCGACTATG GCGCCGGCGA CGTCAAGCAG GCTGTCGCCA ATATCGACAA GCTGACCGGC
CCGGAATGGT ATCCGATTTT CAAGGACCTG CATTCGGGGA TGTTGCTCGA TCTTGCCGGC
CGGGAAAAGG ACGCCGGCGT TCGTCTCGAG CGTGCCTATA AACTCGACGA TTCCGCGCTC
CGCGTTGCCG ATGCCTATGC GCGGTGGCTG TCACGCAACA AGGGCGACGC GGCGGCGCTG
GCCGTGTATG AGTCGTTCGA CAAGAAACTG GCGCGGCATC CGCTGATTCT GGAAGGCATC
AAGGAGACCA AGGCCGGCAA GAAACTGCCG CAGCTCGTCA GTTCGCCGCA AACCGGTGCC
GCCGAAGCTC TTTACGGCAT CGGCGCGTCT CTGACCCGGC GCGGCGGCGA GGATCTGGCG
CTGGTCTATC TGCAACTCGC GCTTTATCTC GCGCCCAATC AGCCGATGGC GCTGTTGTCG
CTCGCCGACC TCTATGAATC GGTGAAGAAG CCGGAGATGG CGATCGGCGC CTATCAGCGC
GTACCTGCCG ATTCGCCCCT GAAACGCAAT GCGCAGATTC AACTCGCGAC CAACCTTGAT
GCCGTCGATC GCAGCGACGA GGCAATCAAG ATTCTCAAGG ATGTCACCGA GCAGGACCCG
AAGGACCTGG AAGCGATCAT GGCGCTCGGC AACATCGAGC GCGGCCACAA GAAGTTCGCC
GATTGCGCAA AAACCTACGC CAAAGGCATC GACGTGATCG CCGAGGCGAA GGACAAGCCG
AACTGGGTCT ACTACTATTT CCGCGGCATC TGCGAAGAGC GGTCGAAGAA TTGGGACAAG
GCGGAAGTCG ACATGAAGAA GGCGCTCGAG ATTCAGCCCG AGCAGCCGCA CGTGCTGAAC
TATCTCGGCT ATTCCTGGAT CGACCGCGGT CTCAACCTCG ACGAAGCCAT GAAGATGATC
AAGCGCGCCG TCGATCAGCG GCCGGACGAC GGCTATATCG TCGACAGCCT CGGCTGGGCC
TATTACCGCA TCGGCAACTA CGAGGAGGCG GTCAAGACGC TCGAGCGTGC CATCAACCTC
AAGCCCGAAG ATCCGACGGT GAACGATCAC CTCGGCGACG CTTACTGGCG CGTCGGCCGG
ACGCTGGAGG CGAAATTCCA GTGGGCGCAC GCGCGCGACC TGAAGCCGGA GCCGGACGAA
CTGCCGAAGA TCGAGGCCAA GATCGAAAAC GGCCTGCCGG CGGATGAAAC CCCGGCGGCG
GCGTCGGCTG ACAAGAAGAA GCAAGACGGC AAGGGCGGCT GA
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| Protein sequence | MLSIRFNRLA MAVAAATSLV LSGPLAAQTP DHPTDTAQFP SAHDLRTMTR AGSYLAARHA
SVERDAKSAA AFYRSALRTD PKNNELLDRA FISSLAEGEI ADAVKLADRI LTIDKSNRVA
RLVIGVHNLK LKKYAAARKN INQSVRGPIT DLVATLLSGW ADYGAGDVKQ AVANIDKLTG
PEWYPIFKDL HSGMLLDLAG REKDAGVRLE RAYKLDDSAL RVADAYARWL SRNKGDAAAL
AVYESFDKKL ARHPLILEGI KETKAGKKLP QLVSSPQTGA AEALYGIGAS LTRRGGEDLA
LVYLQLALYL APNQPMALLS LADLYESVKK PEMAIGAYQR VPADSPLKRN AQIQLATNLD
AVDRSDEAIK ILKDVTEQDP KDLEAIMALG NIERGHKKFA DCAKTYAKGI DVIAEAKDKP
NWVYYYFRGI CEERSKNWDK AEVDMKKALE IQPEQPHVLN YLGYSWIDRG LNLDEAMKMI
KRAVDQRPDD GYIVDSLGWA YYRIGNYEEA VKTLERAINL KPEDPTVNDH LGDAYWRVGR
TLEAKFQWAH ARDLKPEPDE LPKIEAKIEN GLPADETPAA ASADKKKQDG KGG
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