| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3215 |
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| Symbol | |
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| ID | 4031994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3541414 |
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| End bp | 3542424 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637971628 |
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| Product | farnesyltranstransferase |
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| Protein accession | YP_578410 |
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| Protein GI | 92118681 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.153645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCGGTCA TTGTCCCATT CGAAAGCCAC TCGACAGGCT CCATCGACCA GATCGTCGAG
CTCGTCGCCG CCGACATGGA ACGCGTCAAC GCCACTATCC TGTCGCGGAC CGGGTCGGAC
GTCACGATGA TCCCGGAAGT CGCCAACCAC CTGATCTCGT CCGGCGGCAA GCGGCTGCGC
CCGATGCTGA CGCTGGCGAT GGCCCATCTC GCCGGCTATT CCGGCGAAGG CCACATCAAG
CTCGCGGCCT CCGTGGAATT CATGCACACC GCGACGCTGC TGCATGACGA CGTAGTCGAC
GAGAGCGAGC TGCGCCGCGG CAAACTGTCG GCGCGCATGG TGTGGGGCAA CGAGGCCAGC
GTTCTCGTCG GCGACTTTCT GCTCGGACAG GCGTTCCGCA TGATGGTCGA GGTCGGCTCG
CTGCGCGCGC TCGACATCCT GTCGGCGGCG GCGGCCACCA TCGCCGAGGG CGAGGTCATG
CAGCTTGCGG CGGCGAAGAA TACGGCCACC ACCGAGGACG AATACCTCGC GGTCATCCGC
GGCAAGACCG CAGAGCTGTT CGCCGCCGCC TGCGAGGTCG GTCCGGTGCT CGGCGGTCGT
CCGAAGGCCG AGGAAATGGC GGCAGCCAGC TTCGGCATGA ACCTCGGCAT CGCCTTCCAG
CTCGTCGACG ATGTGCTCGA CTATGGCGGC AAGTCGGCAA AGCTCGGCAA GAACATCGGC
GACGATTTCC GCGAGGGCAA GATCACGCTG CCGGTGGTGC TGGCGTTCCG CCGCGGCAAC
GATATCGAAC GGGAATTCTG GGTGCGAGCG CTCGAGCAAG GCGAGATCGG CGACAACGAC
CTCAATCACG CCATCGGGTT GATGACCAAG CATCGCGCGT TGGAGGATAC CCTCAACCGC
GCCCAGCACT ACGGCGCGAT GGCGGTCGAT GCGCTGGCGC TGTTTCCGCC GTCGCCGATG
AAGAGCGCCC TGGAGCAGGT CGTGGCGTTC TGCCTGGCGC GGTCGCACTA A
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| Protein sequence | MAVIVPFESH STGSIDQIVE LVAADMERVN ATILSRTGSD VTMIPEVANH LISSGGKRLR
PMLTLAMAHL AGYSGEGHIK LAASVEFMHT ATLLHDDVVD ESELRRGKLS ARMVWGNEAS
VLVGDFLLGQ AFRMMVEVGS LRALDILSAA AATIAEGEVM QLAAAKNTAT TEDEYLAVIR
GKTAELFAAA CEVGPVLGGR PKAEEMAAAS FGMNLGIAFQ LVDDVLDYGG KSAKLGKNIG
DDFREGKITL PVVLAFRRGN DIEREFWVRA LEQGEIGDND LNHAIGLMTK HRALEDTLNR
AQHYGAMAVD ALALFPPSPM KSALEQVVAF CLARSH
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