Gene Nham_3202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3202 
Symbol 
ID4033368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3527983 
End bp3529299 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content64% 
IMG OID637971615 
Productprotein of unknown function DUF224, cysteine-rich region 
Protein accessionYP_578397 
Protein GI92118668 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCG AATTCACGCC CGCTCAGCTG GCCGACCCGG ATATCGTCGA AGCCGACAAG 
ATCCTCCGCA AGTGCGTGCA TTGCGGGTTC TGCACCGCGA CGTGCCCGAC CTATGTGCTG
CTCGGCGACG AACTCGACAG CCCGCGCGGC CGGATTTATC TGATCAAACA GATGCTCGAA
AAGAACGAGC CGCCGACGGC CGAGGTCGTG AAACACATCG ACCGCTGCCT GTCGTGTCTC
GCCTGCATGA CGACCTGTCC CTCCGGCGTC AACTACATGC ACCTGGTCGA TCAGGCGCGG
GTCAGGATCG AGAAGGAGTA TGTGCGGCCG CTGCCCGAGC GGCTGCTCCG GGCCGTTCTC
GCCTATGTGC TGCCGCGGCC GAGAGTCTTT CGCGCCGGCA TGGTTCTGGC GCGCCTTGGC
CGGCCCCTCG CGGCGCTGCT GCCGGGCTCA AAGCCGGGCG CGACGACGCC GACGTTCTTG
CACAGGATCA AGGCGATGCT GGCGCTCGCG CCGGCGTCGC TGCCGGCTCC CGGAGCGCGC
GCCGGCAGCG TGTTTCCGGC GCAGGGTGCG AAGCGTGGCC GCGTTGCGCT GCTGCAGGGC
TGCGCCCAGC AGGTGCTGGC GCCGCGCATC AACCAGGCCG CGATCAGCCT GCTGACCCGT
CACGGTGTCG AGGTGGTGCT GGTGGCGGAC GAGCAGTGTT GCGGCGCGCT GACGCATCAT
ATGGGCGACG ACCGGGATGC ACTGGCGCGT GCGCGGGCCA ATATCACAAC CTGGATCGCG
GAAGCGGAGC GCGGCGGCCT CGACGCCATC GTGGTGACGG CGTCGGGCTG CGGTACCGTC
ATCAAGGATT ACGGTTACCT GTTGCGGGAG GACCGCGACT ACGCCGGGCC GGCCGCAAAG
ATATCAGGCC TGACCAAGGA CATCACCGAG TATGTCGCGA GCCTCGATCT GCCGCCGCCG
CGCAGTCGCA GCGATCTCGT CATTGCCTAT CACTCCGCCT GTTCGCTTCA GCACGGCCAG
AAAATCACGC AGCTTCCGAA AGATTTGCTT TCCAAGAATG GATTCGTGGT GAAAGATATC
CCGGAGAGTC ATTTGTGTTG CGGTTCGGCG GGGACCTACA ACATTCTCCA GCCTGACATT
GCGAACAGAC TGCGCGACCG GAAGGTCGCC AATATCGCAA GCGTCAAGCC GGACATGATT
GCCGCCGGCA ATATCGGGTG CATGGTTCAG ATTGCCGGTG GAACGTCGGT CCCTGTTGTT
CACACGATTG AACTTCTCGA TTGGGCAACG GGCGGCCCCC GGCCAGGACT GAATTGA
 
Protein sequence
MKTEFTPAQL ADPDIVEADK ILRKCVHCGF CTATCPTYVL LGDELDSPRG RIYLIKQMLE 
KNEPPTAEVV KHIDRCLSCL ACMTTCPSGV NYMHLVDQAR VRIEKEYVRP LPERLLRAVL
AYVLPRPRVF RAGMVLARLG RPLAALLPGS KPGATTPTFL HRIKAMLALA PASLPAPGAR
AGSVFPAQGA KRGRVALLQG CAQQVLAPRI NQAAISLLTR HGVEVVLVAD EQCCGALTHH
MGDDRDALAR ARANITTWIA EAERGGLDAI VVTASGCGTV IKDYGYLLRE DRDYAGPAAK
ISGLTKDITE YVASLDLPPP RSRSDLVIAY HSACSLQHGQ KITQLPKDLL SKNGFVVKDI
PESHLCCGSA GTYNILQPDI ANRLRDRKVA NIASVKPDMI AAGNIGCMVQ IAGGTSVPVV
HTIELLDWAT GGPRPGLN