Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3196 |
Symbol | groEL |
ID | 4033362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 3521996 |
End bp | 3523633 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637971609 |
Product | chaperonin GroEL |
Protein accession | YP_578391 |
Protein GI | 92118662 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGCCA AGGACGTCAG GTTTTCCGGC GACGCGCGCG ACCGCATGCT GCGCGGCGTC GATATCCTCG CCAACGCCGT AAAGGTGACC CTCGGCCCGA AGGGCCGCAA CGTCGTGATC GAGAAGAGCT TCGGCGCGCC ACGCATCACC AAGGACGGCG TCACCGTCGC CAAGGAGATC GAGCTCGACG ACAGGTTCGA GAACATGGGC GCGCAGATGG TGCGCGAGGT CGCCTCCAAG ACCAACGACA CCGCCGGCGA CGGCACCACC ACCGCCACCG TGCTGGCCCA GGCCATCGTC CGCGAGGGCG CCAAGGCCGT TGCCGCCGGC ATGAATCCGA TGGACCTCAA GCGCGGCATC GACATCGCGG CCGCGGCCGT GGTGAAGGAC ATCGGCAAGC GCGCCAAGCC GGTCGCATCC TCGGCCGAAG TCGCGCAGGT CGGCACCATC TCCTCCAACG GCGACACCGC GATCGGCAAG ATGATCGCGC AGGCGATGCA GAAGGTCGGC AACGAGGGCG TCATCACCGT CGAGGAGAAC AAGTCGCTCG AAACCGACGT CGACATCGTC GAGGGCATGA GGTTCGACCG CGGCTACCTC AGCCCCTACT TCGTCACCAA TGCCGAGAAG ATGACCGCCG AACTCGACGG CGCCTACATC CTGCTGCACG AGAAGAAGCT GTCCGGCCTT CAGGCCATAC TGCCGTTGCT CGAGGCGGTG GTGAAGTCGG GCAAGCCGCT GCTGATCGTG GCGGAAGACA TCGAGGGCGA GGCGCTGGCG ACGCTGGTGG TCAACCGGCT GCGGGGCGGC CTCAAGGTCG CAGCCGTCAA GGCGCCCGGC TTCGGCGATC GCCGCAAGGC CATGCTGGAG GACATCGCGA TCCTCACCGG TGGCCAGCTC ATCTCCGACG ACCTCGGCAT CAAGCTAGAG AACGTCACCG TGGACATGCT CGGCCGCGCC AAGAAGGTGG TGATCGACAA GGAGAACACC ACAATCGTCA ACGGCGCCGG CAAGAAGAAA GATATCGAAG CGCGGGTCGG ACAGATCAAG GCGCAGATCG AGGAGACCAC CTCGGACTAC GACCGCGAGA AGCTGCAGGA GCGTCTGGCC AAGCTCGCCG GCGGCGTCGC GGTGATCCGC GTCGGCGGAG CCACCGAGAT CGAGGTCAAG GAAAAGAAGG ATCGCGTCGA GGATGCCCTC AACGCCACCC GCGCAGCCGT GCAGGAAGGC ATCGTGCCCG GCGGCGGCAC CGCGCTGCTG CGCGCCAAGA AGGCGGTCGG GCGCATCGCC AACGACAACC CGGACGTGCA GGCCGGCATC AACATCGTAC TGAAGGCGCT GGAAGCCCCG ATCCGCCAGA TCGCGGAAAA CGCCGGCGTC GAGGGGTCCA TCGTTGTCGG CAAGGTTCTC GAAAACAAGA CCGAGACCTT CGGCTTCGAC GCCCAGAAGG AAGAGTATGT CGACATGGTC GCCAAGGGCA TCATCGATCC GGCCAAGGTG GTGCGCACCG CTTTGCAGGA TGCCGCGTCG GTCGCGGGCC TGCTCGTGAC CACAGAAGCC ATGGTCGCCG AACTGCCGAA GGAGGAGCCG GCGCCGGCTA TGCCGGGCGG CGGTGGCATG GGCGGCATGG GCTTCTGA
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Protein sequence | MSAKDVRFSG DARDRMLRGV DILANAVKVT LGPKGRNVVI EKSFGAPRIT KDGVTVAKEI ELDDRFENMG AQMVREVASK TNDTAGDGTT TATVLAQAIV REGAKAVAAG MNPMDLKRGI DIAAAAVVKD IGKRAKPVAS SAEVAQVGTI SSNGDTAIGK MIAQAMQKVG NEGVITVEEN KSLETDVDIV EGMRFDRGYL SPYFVTNAEK MTAELDGAYI LLHEKKLSGL QAILPLLEAV VKSGKPLLIV AEDIEGEALA TLVVNRLRGG LKVAAVKAPG FGDRRKAMLE DIAILTGGQL ISDDLGIKLE NVTVDMLGRA KKVVIDKENT TIVNGAGKKK DIEARVGQIK AQIEETTSDY DREKLQERLA KLAGGVAVIR VGGATEIEVK EKKDRVEDAL NATRAAVQEG IVPGGGTALL RAKKAVGRIA NDNPDVQAGI NIVLKALEAP IRQIAENAGV EGSIVVGKVL ENKTETFGFD AQKEEYVDMV AKGIIDPAKV VRTALQDAAS VAGLLVTTEA MVAELPKEEP APAMPGGGGM GGMGF
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