Gene Nham_3196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3196 
SymbolgroEL 
ID4033362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3521996 
End bp3523633 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content66% 
IMG OID637971609 
Productchaperonin GroEL 
Protein accessionYP_578391 
Protein GI92118662 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02348] chaperonin GroL 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCCA AGGACGTCAG GTTTTCCGGC GACGCGCGCG ACCGCATGCT GCGCGGCGTC 
GATATCCTCG CCAACGCCGT AAAGGTGACC CTCGGCCCGA AGGGCCGCAA CGTCGTGATC
GAGAAGAGCT TCGGCGCGCC ACGCATCACC AAGGACGGCG TCACCGTCGC CAAGGAGATC
GAGCTCGACG ACAGGTTCGA GAACATGGGC GCGCAGATGG TGCGCGAGGT CGCCTCCAAG
ACCAACGACA CCGCCGGCGA CGGCACCACC ACCGCCACCG TGCTGGCCCA GGCCATCGTC
CGCGAGGGCG CCAAGGCCGT TGCCGCCGGC ATGAATCCGA TGGACCTCAA GCGCGGCATC
GACATCGCGG CCGCGGCCGT GGTGAAGGAC ATCGGCAAGC GCGCCAAGCC GGTCGCATCC
TCGGCCGAAG TCGCGCAGGT CGGCACCATC TCCTCCAACG GCGACACCGC GATCGGCAAG
ATGATCGCGC AGGCGATGCA GAAGGTCGGC AACGAGGGCG TCATCACCGT CGAGGAGAAC
AAGTCGCTCG AAACCGACGT CGACATCGTC GAGGGCATGA GGTTCGACCG CGGCTACCTC
AGCCCCTACT TCGTCACCAA TGCCGAGAAG ATGACCGCCG AACTCGACGG CGCCTACATC
CTGCTGCACG AGAAGAAGCT GTCCGGCCTT CAGGCCATAC TGCCGTTGCT CGAGGCGGTG
GTGAAGTCGG GCAAGCCGCT GCTGATCGTG GCGGAAGACA TCGAGGGCGA GGCGCTGGCG
ACGCTGGTGG TCAACCGGCT GCGGGGCGGC CTCAAGGTCG CAGCCGTCAA GGCGCCCGGC
TTCGGCGATC GCCGCAAGGC CATGCTGGAG GACATCGCGA TCCTCACCGG TGGCCAGCTC
ATCTCCGACG ACCTCGGCAT CAAGCTAGAG AACGTCACCG TGGACATGCT CGGCCGCGCC
AAGAAGGTGG TGATCGACAA GGAGAACACC ACAATCGTCA ACGGCGCCGG CAAGAAGAAA
GATATCGAAG CGCGGGTCGG ACAGATCAAG GCGCAGATCG AGGAGACCAC CTCGGACTAC
GACCGCGAGA AGCTGCAGGA GCGTCTGGCC AAGCTCGCCG GCGGCGTCGC GGTGATCCGC
GTCGGCGGAG CCACCGAGAT CGAGGTCAAG GAAAAGAAGG ATCGCGTCGA GGATGCCCTC
AACGCCACCC GCGCAGCCGT GCAGGAAGGC ATCGTGCCCG GCGGCGGCAC CGCGCTGCTG
CGCGCCAAGA AGGCGGTCGG GCGCATCGCC AACGACAACC CGGACGTGCA GGCCGGCATC
AACATCGTAC TGAAGGCGCT GGAAGCCCCG ATCCGCCAGA TCGCGGAAAA CGCCGGCGTC
GAGGGGTCCA TCGTTGTCGG CAAGGTTCTC GAAAACAAGA CCGAGACCTT CGGCTTCGAC
GCCCAGAAGG AAGAGTATGT CGACATGGTC GCCAAGGGCA TCATCGATCC GGCCAAGGTG
GTGCGCACCG CTTTGCAGGA TGCCGCGTCG GTCGCGGGCC TGCTCGTGAC CACAGAAGCC
ATGGTCGCCG AACTGCCGAA GGAGGAGCCG GCGCCGGCTA TGCCGGGCGG CGGTGGCATG
GGCGGCATGG GCTTCTGA
 
Protein sequence
MSAKDVRFSG DARDRMLRGV DILANAVKVT LGPKGRNVVI EKSFGAPRIT KDGVTVAKEI 
ELDDRFENMG AQMVREVASK TNDTAGDGTT TATVLAQAIV REGAKAVAAG MNPMDLKRGI
DIAAAAVVKD IGKRAKPVAS SAEVAQVGTI SSNGDTAIGK MIAQAMQKVG NEGVITVEEN
KSLETDVDIV EGMRFDRGYL SPYFVTNAEK MTAELDGAYI LLHEKKLSGL QAILPLLEAV
VKSGKPLLIV AEDIEGEALA TLVVNRLRGG LKVAAVKAPG FGDRRKAMLE DIAILTGGQL
ISDDLGIKLE NVTVDMLGRA KKVVIDKENT TIVNGAGKKK DIEARVGQIK AQIEETTSDY
DREKLQERLA KLAGGVAVIR VGGATEIEVK EKKDRVEDAL NATRAAVQEG IVPGGGTALL
RAKKAVGRIA NDNPDVQAGI NIVLKALEAP IRQIAENAGV EGSIVVGKVL ENKTETFGFD
AQKEEYVDMV AKGIIDPAKV VRTALQDAAS VAGLLVTTEA MVAELPKEEP APAMPGGGGM
GGMGF