| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3189 |
|---|
| Symbol | |
|---|
| ID | 4029555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 3515584 |
|---|
| End bp | 3516630 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637971602 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_578384 |
|---|
| Protein GI | 92118655 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCAA CTGCCAGCCT TCCAGGTCTG CCCGCGGACG CGGCCGCCGC GGCTGCGCAG
GGTCTGTCGA TCGTGGTTCC CGTCTACAAT GAGGCCGCCG GGCTCCAGCA GTTGCACGAA
CGCCTCGGCG CGCTTGCGGC AAAGCTGAGG CAGCGCTTCG GCCTCGCCTG CGAGGTCGTC
TACGTCGACG ACGGCTCGAC CGACGGCACG CTGGGCCTGG CCCGCGCGCT CCCCGCCGCC
GCGATCGACG TGCAGGTGGT GTCGCTGTCG CGCAACTTCG GCAAGGAAGC CGCCCTGATG
GCGGGCCTGG ATCACGCGCG GCGCGGCGCG CTGCTGTTCA TGGACGGCGA CGGCCAGCAT
TCGCCCGACC TCGTCGAGCG GCTGGTGGAT CACTGGATCA ACGGCGGCTA CGACGTCATC
TACACAGCGA AAGCGCATCG GACGAACGAG TCGGTGCTGC GGCGGATCGG CGTGCACAGC
TTCTACGCGA TCATCAACTG GGGCGCGCGC CAGCGAATTC CCGAAGACGC CGGCGACTTC
CGCCTGTTGT CGCCCCGCGC AGCCGCCGCG CTGCGCCAGT TGCCCGAGCG CAACCGCTTC
TTCAAGGGCC TCGCGAGCTG GATCGGCTTC CGGCAGATTC GCGTCGACTA CGAACCCGAC
GTTCGCGCCC ACGGCATGAC CACGTTCAAT ACCGCGCGGC TGCTCGGTCT GTCGATCGAG
GGGCTGACGT CGTTTTCGGT GGCGCCGCTG CGGCTGGCCA GCCTGCTCGG GTTGCTGCTG
GCGCTTGCCG CCTTCCTGTT CGGATTGTCG ATCCTGTGGG AAACCTGGGT CGATGGTGAG
TCGGTACCCG GCTATCCGTC GCTGGTGGTC GGCCTGATGA CGCTGGGCGG CGTGCAACTC
CTGATGATCG GCATCGTCGG CGAATACATC GGCAAGATTC TCTCCGAACT GAAGGCGCGA
CCGATCTACT TCGTCGCCGA GCACAGCGTG AAGCAGGCCG AGGACGAACC GTCCGCCGGC
GACCCGCACC GGACCGCCGC CGAATGA
|
|---|
| Protein sequence | MTPTASLPGL PADAAAAAAQ GLSIVVPVYN EAAGLQQLHE RLGALAAKLR QRFGLACEVV
YVDDGSTDGT LGLARALPAA AIDVQVVSLS RNFGKEAALM AGLDHARRGA LLFMDGDGQH
SPDLVERLVD HWINGGYDVI YTAKAHRTNE SVLRRIGVHS FYAIINWGAR QRIPEDAGDF
RLLSPRAAAA LRQLPERNRF FKGLASWIGF RQIRVDYEPD VRAHGMTTFN TARLLGLSIE
GLTSFSVAPL RLASLLGLLL ALAAFLFGLS ILWETWVDGE SVPGYPSLVV GLMTLGGVQL
LMIGIVGEYI GKILSELKAR PIYFVAEHSV KQAEDEPSAG DPHRTAAE
|
|---|
| |