Gene Nham_3187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3187 
SymbolhisZ 
ID4029553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3513349 
End bp3514536 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content67% 
IMG OID637971600 
ProductATP phosphoribosyltransferase regulatory subunit 
Protein accessionYP_578382 
Protein GI92118653 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTCG ATATGAGCCG TAGCGCGGAA AATCCTGCAA CCCGATCGCC CTCCTGGGCG 
GACGGACTGC TGTCGTCGTT CGCCCAGGCC GGCTACGTCA AGGCTGAGCC CGCGATCCTT
CAACCGGCCG AGCCGTTTCT GGACCTGTCC GGCGAGGACA TCCGCAAGAG CCTTTACCTG
ACCTCGGACG CGGGCAGCGA GGAGCTCTGC CTGCGTCCCG ACCTGACCAT CCCGGTGGCG
CGGGACTATC TTGCCTCCGG CAAAGCCGGC CAGCCGGCCG GATTCTGCTA TCTCGGGCCT
GTGTTCCGCT ATCGCGGCGG CCGATCGAGC GAATTCCTCC AGGCCGGCAT CGAATCGTTT
GGCCGGCAGG ATCGCGCCGC CGCCGACGCC GAGATGCTCG CGCTCGGCCT TGAAGCCGCT
GCGGCTTTCG GCATCACCGA TGTGGATATC CGCACCGGCG ACGTCGCGCT GTTCACCGCG
CTGATCGATG CGCTCGAGCT TTATCCGGTG TGGCGGCGCC GGCTGATCAA GGGTTTCAAC
CGCAAGTCCA GTCTTGCGCA GGATATCGAG CGGCTGACGC TCGCGACCGG GCCCGGGCAC
AACGAATACG AAGGCGTGCT TGCGGCGCTC GCGGGTTCGG ATCGCAAGGC CGCGCTGGCA
CTGGTGACGG ACATGATGTC GATCGCGGGC GCGACCAATG TCGGCGGCCG CACCCTGGCC
GAGATCGCCG ACCGCTTTCT CGAACAATCC ACGCTGAAGA GCGGCGCGCT GCCGCGCGAC
GCGCTGACCA TCATCAAGCG GTTTCTCGCG ATAGCGGGCG ATCCCGACGA GGCGCTCGGC
GAGCTGCGCG CGCTGGCTTC CGACGCTGGT CTCGATATCC ACACCGCGAT CGATCAGGTC
GAAAGCCGTA TTGGCTTCAT GGCGGCGCGC GGCATCGAAA CCGGCAGCAT CGGCTTCGCG
ACGTCGTTCG GCCGCGGCGT CGACTACTAC ACGGGCTTTG AATTCGAGTT GCAGCGCAAG
GGCAACGGCG ACGAGCCGCT GGTTGCCGGC GGTCGCTACG ATGGCCTGAT GACGCAACTG
GGTGCAGCCG CGCCGATCCC GGCGGTCGGC TTCTCGATCT GGATCGAGGC CTTGACACGG
TTCGCGGGTG AAGCCTCCGC GAGCCGAACC GGCAGGAGCG CGTCATGA
 
Protein sequence
MDFDMSRSAE NPATRSPSWA DGLLSSFAQA GYVKAEPAIL QPAEPFLDLS GEDIRKSLYL 
TSDAGSEELC LRPDLTIPVA RDYLASGKAG QPAGFCYLGP VFRYRGGRSS EFLQAGIESF
GRQDRAAADA EMLALGLEAA AAFGITDVDI RTGDVALFTA LIDALELYPV WRRRLIKGFN
RKSSLAQDIE RLTLATGPGH NEYEGVLAAL AGSDRKAALA LVTDMMSIAG ATNVGGRTLA
EIADRFLEQS TLKSGALPRD ALTIIKRFLA IAGDPDEALG ELRALASDAG LDIHTAIDQV
ESRIGFMAAR GIETGSIGFA TSFGRGVDYY TGFEFELQRK GNGDEPLVAG GRYDGLMTQL
GAAAPIPAVG FSIWIEALTR FAGEASASRT GRSAS