| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3178 |
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| Symbol | |
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| ID | 4029544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3505146 |
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| End bp | 3506450 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637971591 |
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| Product | three-deoxy-D-manno-octulosonic-acid transferase-like |
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| Protein accession | YP_578373 |
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| Protein GI | 92118644 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.88457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAGCT CAATGCCGGC GACGCTGCGC CTCTACAGCA GACTGTCCGC CGCCGCCGCC
CCGCTGACGC CAGCCCTTTT GAAGCGGCGG CTGAAGCAGG GCAAGGAAGA TCCCGCGCGC
ATCGACGAGC GGCGGGGCAT CACCCGACAG CCCCGCCCTG CAGGCCCGCT GATCTGGATT
CACGGCGCGA GCGTCGGCGA AGTGCTGGCC GCAGCAGCGT TGATCGAACG GCTGCGGGCG
CTGAATATCC GCATTCTGCT CACGTCGGGC ACCGTGACCT CGGCGGCTGT CGTCGCGAAG
CGATTCCCGC CGGATATCAT TCACCAGTAT GTCCCCTACG ATTCGCCGCG CTTCGTGGCG
CGCTTTCTCG ATCACTGGCA GCCGGGTCTT GCGCTCTTCG TCGAATCGGA TCTGTGGCCC
AATCTAATTC TGGCTGGCGG CGCGCGCCGT CTGCCGATGG TGCTGATCAA CGGACGGATG
TCGCATCGCT CGTTCCCGCG CTGGCGCAGG CTATCGGGAA CGATCGCCGC GCTGCTCGAA
CAGTTCGACA TCTGCCTCGT TCAGTCGGGA ATCGACGCGG AGCGCTTCAC GGTGCTCGGC
AGCCGTAATG TCATCACGAC CGGAAACCTC AAGCTCGACG TGCAGGCTCC GCCGGCCGAC
GAGGCCAGGC TGGAACGACT GCTATTCGTC ACCCGCGGCC GCCCGGTGGT GGTGGCGGCG
TCGACCCATC CGGGCGAGGA AGAGATCCTT CTCAAAACGC ACCGGACGCT GGCTGTTCAC
TTCCCCTTGC TCTTGACCGT GATCGTTCCA CGCCATCCCG GTCGGGGCGA AGCGATCGCC
CGCATGATCG CAGCGTCCGG CGCGCAGGTC GCGCGGCGCT CGCTGGAGGA ACTGCCGACG
GCGAGGACGG ACATCTATAT CGCCGACACC ATGGGCGAAC TGGGCTTGTT CTACCGGCTG
GCGCCGATCG TTTTCATGGG CGGTTCGCTG GTGCCGCACG GCGGCCAGAA TCCGATCGAG
GCGGTCAAGC TCAATGCCTC CATCGTGCAC GGGCCGCATG TCTTCAACTT CACCGATGTC
TATGATGCGC TCGACCGCGC AGGCGGCGCG CGCCGGGCCG GCGACGGTGA AGCTCTGACG
AAGCAACTCG GCCATCTGCT GAACGATTCC GCCGCCCGCG ACGCCGCGGC GACGGCTGCG
GCCCAGGTGG TGGATCGGCT CGGCGGCGCG CTGGATCGCA CGCTGGCCGC GCTCGAGCCG
TATCTGTTGC AGTTGCGGCT GGAACGGGGA GCGGCCGATG CATGA
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| Protein sequence | MPSSMPATLR LYSRLSAAAA PLTPALLKRR LKQGKEDPAR IDERRGITRQ PRPAGPLIWI
HGASVGEVLA AAALIERLRA LNIRILLTSG TVTSAAVVAK RFPPDIIHQY VPYDSPRFVA
RFLDHWQPGL ALFVESDLWP NLILAGGARR LPMVLINGRM SHRSFPRWRR LSGTIAALLE
QFDICLVQSG IDAERFTVLG SRNVITTGNL KLDVQAPPAD EARLERLLFV TRGRPVVVAA
STHPGEEEIL LKTHRTLAVH FPLLLTVIVP RHPGRGEAIA RMIAASGAQV ARRSLEELPT
ARTDIYIADT MGELGLFYRL APIVFMGGSL VPHGGQNPIE AVKLNASIVH GPHVFNFTDV
YDALDRAGGA RRAGDGEALT KQLGHLLNDS AARDAAATAA AQVVDRLGGA LDRTLAALEP
YLLQLRLERG AADA
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