Gene Nham_3175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3175 
Symbol 
ID4029541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3502710 
End bp3503528 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content66% 
IMG OID637971588 
Productdienelactone hydrolase 
Protein accessionYP_578370 
Protein GI92118641 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.391894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTGC TGTCAGCACT TGTTTCGGTC GTGATCCTTG CGTCGACGGT CACGACATTC 
GCGGCGTCCG GCAAACCGCC GCCGCCCCAA CGAGTCGACA TTCCGCAGGC CAGCGGGGTG
CTGCATGGCC TGCTCTACAA ACCCGACGGC AATGGCCCGT TCGCAACGGT TATCGCCTTG
CATGGCTGCA GCGGTCTGGA GCACGGCGGG CAGATCCAGC CGCGCTATCG CGACTGGACC
GAGCGGCTGT TAAAGGCCGG GAACGCCGTG CTGTTTCCAG ATAGTTATGG CTCGCGGAGC
GCCGGTCAGC AATGCCAGCC CAAACAGCGC AAGATCCACG CGCGCCGCGA GCGCATCGCC
GATATCCGCG CCGCGCAGCA ATGGCTGATT CATCAATCCT GGGTTCTGCA TGATCGCATC
GGCCTGCTCG GATGGGACTC GGGCGCCAGT GCCGTATTAT GGGCGGTTCG TCCGCAGCTT
GCACCGGCCG GCCGGCATGA CGATTTCCGT TCGGCCGTGG CGCTCTACCC GAACTGCCGG
ATAGCGTCGC GCCTCGGCTG GAGCGCGCGC GTTCCAACTT TGGTGCTGGT TGGTGCCGAC
GACGATCTCA GTTCGCCGTC CGCCTGCCGG CAGATGGTCG ACAATGCGCG CGGACGCAGC
GCGCTCGCCC GCATCATCGT CTACCCCAAC GCCCATCATG GTTTCGACCG GGCGAACGTG
CCGCTCCATC TGGTTGCCGG GAGACACGGC CATATCGGCA CCAATCCCGG GGGACGGGTG
GACTCGCAAA AGCAGGTCGC GGCCTGGCTC TCGCGTTAG
 
Protein sequence
MRLLSALVSV VILASTVTTF AASGKPPPPQ RVDIPQASGV LHGLLYKPDG NGPFATVIAL 
HGCSGLEHGG QIQPRYRDWT ERLLKAGNAV LFPDSYGSRS AGQQCQPKQR KIHARRERIA
DIRAAQQWLI HQSWVLHDRI GLLGWDSGAS AVLWAVRPQL APAGRHDDFR SAVALYPNCR
IASRLGWSAR VPTLVLVGAD DDLSSPSACR QMVDNARGRS ALARIIVYPN AHHGFDRANV
PLHLVAGRHG HIGTNPGGRV DSQKQVAAWL SR