| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3174 |
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| Symbol | xseA |
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| ID | 4029540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3501088 |
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| End bp | 3502713 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637971587 |
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| Product | exodeoxyribonuclease VII large subunit |
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| Protein accession | YP_578369 |
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| Protein GI | 92118640 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.515348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCAA ATCCTGCACA ACTCCTGGCG AACGCGCCGG AATATACCGT CTCTGAGTTG
TCCTCGGCGC TGAAGCGCAC CGTGGAGAAC GCTTACGGCC ATGTGCGGGT GCGCGGCGAG
ATATCCGGCT TTCGCGGCCC GCATGGATCG GGCCACTGCT ATTTCGCGCT GAAGGACGAG
AGCGCCAAGA TCGAGGCGGT GATCTGGAAA GGCGTCCATG GCCGGATGCG GTTCAAGCCG
CAGGAGGGCC TCGAAGTCAT CGCCACCGGC AAGCTGACCA CCTATCCGGG CTCGTCGAAA
TACCAGATCG TGATCGAGGC GCTGGAACCT GCCGGCATCG GCGCGCTGAT GGCGCTGATG
GAGGAGCGCA AGAAGAAGCT CGCGGCGGAA GGCCTGTTCG ACGAAGCCCG CAAGCAACTG
CTGCCCTGGC TGCCCGAGGT AATCGGCGTC GTGACCTCCC CGACCGGCGC AGTGATCCGC
GATATCCTGC ATCGGCTGGA GGATCGTTTT CCGCGCCGTG TGCTGGTGTG GCCGGTGCGG
GTGCAGGGCG AAGGCTCGGC GGAACAGATC GCCGCCGCCA TCGACGGCTT CAATGCGCTG
CCGGAAGGCG GACACGTCCC GCGCCCCGAC CTCCTGATCG TCGCGCGCGG CGGCGGCTCG
CTCGAAGACC TGTGGTCCTT CAACGAGGAA ATCGTGGTGC GCGCCGCCGC CAGCAGCATG
ATCCCGCTGA TCTCGGCGGT CGGTCACGAG ACCGACGTGA CGCTAATCGA TTTTGCGGCC
GACAAACGCG CGCCTACTCC GACGGCTGCC GCCGAAATGG CGGTGCCGGT CCGCACCGAG
CTGTTCGTGG AAGTCTCGGG TTTCGCGGCC CGCGCCATCG TCGCATGGCG GCGCGGTCAC
GACGACCGGC GCACCGAATT GCGCTCGGCC GCCCGCGCGC TGCCGGGAGC CGGCGAGTTG
CTCGCGATTC CCCGCCAGAA GCTCGACGGC GTCGCTGCCG CATTGCCGCG CGTCTTGCGT
GCAAGCACAC ACCTGCATCA TCGCCGCTTT ACGGAAATCT CCCGCGGACT CACGCTGCGC
GTGCTGCGCG CACAGGTCGC GCACGCAAAA CAGTCCGTCG CCGCGACCGG CGCGCGGCTT
GCGCACGGCA CGCAGGTCGT GCTGCGTCAC CGCCGCGATC GCTTCGTGGG ACTGGCGATC
CGGCTCAAGG CATCGCGACT CGCCAACGCA CAGGCGCAGC GCGACCGGAT CGCGCGCGCG
AATGAGCGCA CCCAAAGGCT TGCCGAGCGG ACGCGGCGGG CGCTGGCCAC CTTGCTGCAG
CGGCATGAGG CGCGCATCAC GTATTCCGGC CAGTTGCTGG CGGCGTTTTC CTATCGCGGC
GTGCTCGCGC GCGGTTTCGC GCTGGTCCGC GACGACGCCG GACAGGCATT GCGAAGCGCA
TCGGCGGTCG GTCCCGGCGC ACGGCTGACA CTGGAGTTCA CCGACGGACG GGTAGCGGCA
ACCGCCGACG ACGATCAATC CGCAGCGACA TCGTCCGCTC CGACAGGATC CAACCCGAGA
GGCCGGCCCA AACCGGCATC CGGCAAGCGC GCAGCCAAGG CCGCCGATCA GGGAAGCCTG
TTCTAA
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| Protein sequence | MPANPAQLLA NAPEYTVSEL SSALKRTVEN AYGHVRVRGE ISGFRGPHGS GHCYFALKDE
SAKIEAVIWK GVHGRMRFKP QEGLEVIATG KLTTYPGSSK YQIVIEALEP AGIGALMALM
EERKKKLAAE GLFDEARKQL LPWLPEVIGV VTSPTGAVIR DILHRLEDRF PRRVLVWPVR
VQGEGSAEQI AAAIDGFNAL PEGGHVPRPD LLIVARGGGS LEDLWSFNEE IVVRAAASSM
IPLISAVGHE TDVTLIDFAA DKRAPTPTAA AEMAVPVRTE LFVEVSGFAA RAIVAWRRGH
DDRRTELRSA ARALPGAGEL LAIPRQKLDG VAAALPRVLR ASTHLHHRRF TEISRGLTLR
VLRAQVAHAK QSVAATGARL AHGTQVVLRH RRDRFVGLAI RLKASRLANA QAQRDRIARA
NERTQRLAER TRRALATLLQ RHEARITYSG QLLAAFSYRG VLARGFALVR DDAGQALRSA
SAVGPGARLT LEFTDGRVAA TADDDQSAAT SSAPTGSNPR GRPKPASGKR AAKAADQGSL
F
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