| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3158 |
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| Symbol | |
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| ID | 4030231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3481242 |
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| End bp | 3482693 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637971571 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_578353 |
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| Protein GI | 92118624 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGTA TTTCCACGAT TTTCGTTGCC GTCTGCATGG TGCTGGTCTC CGGCTCGCTC
GGCCTCGTGC TCTATTCGCT GACGGGCCTG CGCGCGTCGG AAGCCGCCAT CGTGGCGCTG
GCCACCCTGA CCTGCCTCGT TCTCTACAAC GCGGTGTCGA TGCGGATGCG CGTGCGCGGC
GACGTCAATG GACAGATCGC CGATCTGTCG CGCGGCATCG CCGACCTCGC CCGCCAGGTC
ACCGAATTCG GACGCCGCCT CGCGGCGGCC GAAAGCAAGA TCGCCGCGGC GAATTCCGCT
GCGTCGGACC GCACTCAATC GGGACTTCAA TCGGCACTTG GCGAAATCAA CGAACTCGGC
GGGCTGGTCA AGCAACTAGC CGCCACGGTT GCCGCCCATG ACGACATGCT GGCGTTGTTG
CCGTCGGCCG CCGCGGCGCC CATGGCCGAA CCTGTCCCGG ACACAAAGCC GGCTCACGCG
CCGGCACGGG CCGCACCCGC GCCTCCCGCC GCCCGGCCTA TTGCTGCGCC GGCCGGCAAC
GACGCGCAGA CCCTGACAAC GATCAAGAGC GCCATCGAGG CCAACAGCGT CGATATCTTC
CTGCAGCCGA TCGTCACGCT GCCGCAGCGC AAGGTGCGTT ACTACGAAGC CGTGACGCGG
CTGCGCGATG CCCGCGGCGA AATCCTGGCG GCCGGCGATT TCATTCCCGC TGCCGAAGCC
GCCGGTCTCA TGGGGCGCAT CGACAATATG GCCATTTTCC GCTGCGTGCA GGTGCTGCGG
CGGCTTCAGG TGCGCAACAA GGAGGTCGGC GTGTTCTGCA ACGTCGCCGC GGCGACGCTC
AGTAATCCCG CGACGTTCGC GCAGTACCTC GATTTTCTCG AAGCCAATCA TGCGCTGGCG
CCCTCGCTGA TCCTCGAATT CAAGCACAGT ACGCTGCGCA CTCTCGGCAC GACGGAGAGC
GAGCACCTCG CCGCGCTGGC GCAGCGCGGT TACCGATTCT CCATCGATCA CGTCAAGGAT
TTGCGGATCG AGCCGCGCGA ACTGGCCGAT CGCGGCGTCC GCTTCATCAA AATGCCCGCC
TCGCTCCTGC TGGACCAGAA GCAGACCTCG ACCTCCGATA TCCATCCGGC CGACATCTCC
GATCTGCTCG CACGCTTCGG CATCGACCTG ATCGTGGAAA GGATCGAAGA CGAACGGGCG
GTGGTCGATC TGCTCGACTA CGACGTCCGC TTCGGCCAGG GCTTTCTGTT CGCCGCGCCG
CGGCCGCTGC GTCAGGATGC GGCAGAAGAC ACAGTCGACA AGGCAAAGCC CGTCGCTAAT
GGCACGGCCG GACCCGGCTG GACCGATGCA ACCGGAACCG GCATGATGAA GGCTGGCGCA
ATCAAACCCG AACGTCCGCC CCGCATGACC GGTAACGCTG CCCTGACGCG CCGCGCCGGC
GGCGTGGTCT GA
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| Protein sequence | MIRISTIFVA VCMVLVSGSL GLVLYSLTGL RASEAAIVAL ATLTCLVLYN AVSMRMRVRG
DVNGQIADLS RGIADLARQV TEFGRRLAAA ESKIAAANSA ASDRTQSGLQ SALGEINELG
GLVKQLAATV AAHDDMLALL PSAAAAPMAE PVPDTKPAHA PARAAPAPPA ARPIAAPAGN
DAQTLTTIKS AIEANSVDIF LQPIVTLPQR KVRYYEAVTR LRDARGEILA AGDFIPAAEA
AGLMGRIDNM AIFRCVQVLR RLQVRNKEVG VFCNVAAATL SNPATFAQYL DFLEANHALA
PSLILEFKHS TLRTLGTTES EHLAALAQRG YRFSIDHVKD LRIEPRELAD RGVRFIKMPA
SLLLDQKQTS TSDIHPADIS DLLARFGIDL IVERIEDERA VVDLLDYDVR FGQGFLFAAP
RPLRQDAAED TVDKAKPVAN GTAGPGWTDA TGTGMMKAGA IKPERPPRMT GNAALTRRAG
GVV
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