Gene Nham_3156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3156 
Symbol 
ID4030229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3479057 
End bp3479500 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content65% 
IMG OID637971569 
ProductTadE-like 
Protein accessionYP_578351 
Protein GI92118622 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.861015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGGTT CCGCGCCACG TCCGTTTTTT CTTGATCTTC GGCTCTTTGC GCGCTGCGGC 
CGCGGCGCAT CCGCGGTCGA GTTCGCGATG TTGCTGCCGC TGTTTCTGGT GCTGGTGTTC
GGCATCGTCG TGTTCGGCGC CTACCTCACC ATGGTCCACA GCGTGCAGCA ACTCGCCGCG
GAAGCGGCGC GCTCCTCGGT CGCCGGCCTG AGCGAGACCG AGCGCGTCAG CATTGCCGAA
AATTATGTCA CGGCGAACGC CGGGTCATAT CCGCTGTTGC AGCCCAGCCA TCTCACGGTG
AGCGCGGCGA CGTCGGGCAG CGACGTCTTC GTCGTCACCG TCAACTACGA CGCCTCGGAC
AGCTTCATCT ACACGTTGCC GTTCGTGCCG GCGCCGACCT CTACCATCGC GCGCTCGGCG
GCGATCCCGT TCGGCGGCTT TTGA
 
Protein sequence
MTGSAPRPFF LDLRLFARCG RGASAVEFAM LLPLFLVLVF GIVVFGAYLT MVHSVQQLAA 
EAARSSVAGL SETERVSIAE NYVTANAGSY PLLQPSHLTV SAATSGSDVF VVTVNYDASD
SFIYTLPFVP APTSTIARSA AIPFGGF