Gene Nham_3150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3150 
Symbol 
ID4030338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp3473017 
End bp3473709 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content67% 
IMG OID637971564 
Productribonuclease T2 
Protein accessionYP_578346 
Protein GI92118617 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG3719] Ribonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTGGG TGTCTCGCGC GATGGCCGCG TCTGTTCTGT CGTGGCTGAT CCTGCTCGCG 
GGGTGGTCGG GCAGCGCGGC GGCAAGGGAC CATCGCCAGA ACGCGCCGGG CGCATTCGAT 
TTCTATGTGC TGTCGCTGTC ATGGTCGCCG TCATTTTGCG CGAGTGCTGC GGAGCGCGGT 
AACACCAGCC GGTCGCAGCA GGCCCAGTGC GGCGGGCGGC CGTTTGCCTT CGTGGTGCAC 
GGCCTTTGGC CGCAATACGA GCACGGCTTT CCGGGTTATT GCGAGCGTCC CGCGCCGCGG 
CTCGATCGCC GCATCATGTC CTCGATGCTG GACCTGATGC CGGCCCCCGG TCTGATCTAC 
AGCGAGTGGG ACAAACACGG CACCTGCTCG GGGCTCGGCG CGCGGGCCTA TTTCGAGACC 
GTCCGCAAAG CGCGCGCCGC GGTGAAGGTT CCTGCGGAGT TCCTCGATCT TGAGGCGCCG 
AAGAGCATCG CGCCCGACGC CATCGAGGAG GCCTTCATCA AGGACAATCC GGGCCTCAGC 
CATTCCGCGA TCGCGGTGAT CTGCGACCGG ACCAGGCTCA GCGAGGTGCG GATCTGCATG 
AACAAGGACC TGCAATTCCG CGCCTGCGAG GAAATCGACC GCCGCGCCTG CCGCAGGGAC 
CAGGTGGTGC TGCCGCCGAT GCGGGGCGGA TAG
 
Protein sequence
MRWVSRAMAA SVLSWLILLA GWSGSAAARD HRQNAPGAFD FYVLSLSWSP SFCASAAERG 
NTSRSQQAQC GGRPFAFVVH GLWPQYEHGF PGYCERPAPR LDRRIMSSML DLMPAPGLIY 
SEWDKHGTCS GLGARAYFET VRKARAAVKV PAEFLDLEAP KSIAPDAIEE AFIKDNPGLS 
HSAIAVICDR TRLSEVRICM NKDLQFRACE EIDRRACRRD QVVLPPMRGG