Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3149 |
Symbol | |
ID | 4030337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 3471996 |
End bp | 3472853 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637971563 |
Product | hypothetical protein |
Protein accession | YP_578345 |
Protein GI | 92118616 |
COG category | [R] General function prediction only |
COG ID | [COG2961] Protein involved in catabolism of external DNA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.264033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTACC GCCACGCCTT CCACGCCGGT AACTTCGCCG ACGTCATCAA GCATATCGTG CTGGTCCGCA TCCTGACCTA TCTGCACGAG AAGCTGGCGG CGTTCCGCGT CATCGACACC CATGCCGGCG CGGGCGTTTA CGATCTGACC GGCGACGAGG CCGGACGCGG CGGCGAATGG CTGACCGGCA TTGCGCGGCT GATGCAGGCG CGGTTTTCGG ATGCCGTCGG CCCCTTGGTC GCGCCCTATC TCGATATCGT CAGGGCCTTC AATCCGCAGC GCGGCCTGCT GCGGTCCTAT CCGGGATCGC CGCTGATCGC GCGCGCTTTG CTGCGGCCGC AGGACCGACT GGTCGCGTGC GAACTCGAAC CCGTCGCCCG CAAGCACCTG ATCGGCGCGC TGCGCCGCGA CGCCCAGGCA AACGTGGTCG ATCTCGACGG CTGGGTGGCG CTGCCGGCTT TCGTGCCGCC GAAGGAGCGG CGCGGGCTGG TGCTGATCGA TCCGCCGTTC GAGCGCAAGG ACGAGTTCGA ACGGCTCGCC GGCGGATTTG CCGAGGCCTT CGCGAAATGG CCGACCGGCA GTTACCTGCT GTGGTATCCG GTGAAAAGCC GCCGGGCTGC GGACGATCTG GCCCGCAGGG TCGGCGCTGC GACCGGTGGT GGGGCCGACA AATGCCTGCG GCTGGAATTC AGCGTGGCGC CGCAGACCGC GGACGGGCCG CTCACTTCGG CCGGGCTCCT GATCGTCAAT CCGCCGTGGA CGCTGATGGC CGAGTTGAAG GCCATCCTTC CCGAACTGGA GAAGCCGCTG GGTCAGGGCG GGGCCGCCAG GTTCAGGCTC GATGCGGTCC GGGGCTGA
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Protein sequence | MNYRHAFHAG NFADVIKHIV LVRILTYLHE KLAAFRVIDT HAGAGVYDLT GDEAGRGGEW LTGIARLMQA RFSDAVGPLV APYLDIVRAF NPQRGLLRSY PGSPLIARAL LRPQDRLVAC ELEPVARKHL IGALRRDAQA NVVDLDGWVA LPAFVPPKER RGLVLIDPPF ERKDEFERLA GGFAEAFAKW PTGSYLLWYP VKSRRAADDL ARRVGAATGG GADKCLRLEF SVAPQTADGP LTSAGLLIVN PPWTLMAELK AILPELEKPL GQGGAARFRL DAVRG
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