Gene Nham_3149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3149 
Symbol 
ID4030337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3471996 
End bp3472853 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content68% 
IMG OID637971563 
Producthypothetical protein 
Protein accessionYP_578345 
Protein GI92118616 
COG category[R] General function prediction only 
COG ID[COG2961] Protein involved in catabolism of external DNA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.264033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTACC GCCACGCCTT CCACGCCGGT AACTTCGCCG ACGTCATCAA GCATATCGTG 
CTGGTCCGCA TCCTGACCTA TCTGCACGAG AAGCTGGCGG CGTTCCGCGT CATCGACACC
CATGCCGGCG CGGGCGTTTA CGATCTGACC GGCGACGAGG CCGGACGCGG CGGCGAATGG
CTGACCGGCA TTGCGCGGCT GATGCAGGCG CGGTTTTCGG ATGCCGTCGG CCCCTTGGTC
GCGCCCTATC TCGATATCGT CAGGGCCTTC AATCCGCAGC GCGGCCTGCT GCGGTCCTAT
CCGGGATCGC CGCTGATCGC GCGCGCTTTG CTGCGGCCGC AGGACCGACT GGTCGCGTGC
GAACTCGAAC CCGTCGCCCG CAAGCACCTG ATCGGCGCGC TGCGCCGCGA CGCCCAGGCA
AACGTGGTCG ATCTCGACGG CTGGGTGGCG CTGCCGGCTT TCGTGCCGCC GAAGGAGCGG
CGCGGGCTGG TGCTGATCGA TCCGCCGTTC GAGCGCAAGG ACGAGTTCGA ACGGCTCGCC
GGCGGATTTG CCGAGGCCTT CGCGAAATGG CCGACCGGCA GTTACCTGCT GTGGTATCCG
GTGAAAAGCC GCCGGGCTGC GGACGATCTG GCCCGCAGGG TCGGCGCTGC GACCGGTGGT
GGGGCCGACA AATGCCTGCG GCTGGAATTC AGCGTGGCGC CGCAGACCGC GGACGGGCCG
CTCACTTCGG CCGGGCTCCT GATCGTCAAT CCGCCGTGGA CGCTGATGGC CGAGTTGAAG
GCCATCCTTC CCGAACTGGA GAAGCCGCTG GGTCAGGGCG GGGCCGCCAG GTTCAGGCTC
GATGCGGTCC GGGGCTGA
 
Protein sequence
MNYRHAFHAG NFADVIKHIV LVRILTYLHE KLAAFRVIDT HAGAGVYDLT GDEAGRGGEW 
LTGIARLMQA RFSDAVGPLV APYLDIVRAF NPQRGLLRSY PGSPLIARAL LRPQDRLVAC
ELEPVARKHL IGALRRDAQA NVVDLDGWVA LPAFVPPKER RGLVLIDPPF ERKDEFERLA
GGFAEAFAKW PTGSYLLWYP VKSRRAADDL ARRVGAATGG GADKCLRLEF SVAPQTADGP
LTSAGLLIVN PPWTLMAELK AILPELEKPL GQGGAARFRL DAVRG