Gene Nham_3142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3142 
Symbol 
ID4030330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3465834 
End bp3466865 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content67% 
IMG OID637971556 
ProductN5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 
Protein accessionYP_578338 
Protein GI92118609 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03533] protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.764065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCGGCG GACGATCGAC AGTCGCGACC CGTAGCTCAG CCAAAAAACG GCGGCCGACG 
CGGGCTGTAG CCAAAACTGC AAACCCCTCC GCCGCCGGAA CCCCGGCTCC CGTACTCGTG
ACGATTTTCG ACTACGTCCG CTTCGCTGCC GCAAGGCTCA CGCGCGCTCG CGTTACGGTT
GCGCACGGCA CCACTGATCC GGTTGCCGAG GCCGCCTTCC TGGTCGGCGA GGCCATGCAC
CTGCATCCGG ACGAGGTCGA GCCGCTGGCC GCGCGGCGTG TGCCGAAGGC GGCCGGCCGG
CGCATCCTCG GCTGGATCGA GCAGCGCATC GCGACCCGCA AGCCCGCCGC CTATCTCGTC
AACAGGATGT ATATGCGCGG CATGGCGTTC TATGTCGACG AACGTGTGAT CGTGCCGCGC
TCGTTCATCG GAGAGCTTCT GGATTCGCAT TTCGGCGGCG ACGATGTGCT GCGTCTGCGC
GATCCCGCGA CGGTGACCCG CGTGCTCGAT CTCTGCACCG GCTCGGGATG CCTTGCCATT
CTGGCCGCGC GCGCGTTTCC GAATGCGACG GTCGATGCGG CCGACCTGTC GGCGGACGCG
CTCACCGTAG CCGAGCGCAA CGTGCAAGAG CACCGCCTTG AAGATCGCAT TCAACTGGCA
CAGGGCGACC TGTTCGCGGC AGTCAGCGGC AAGCGATACG ATCTCATCAT CTCGAACCCG
CCCTATGTCG ATGCGCAGGG CATGGCGAGC CTGCCGCACG AGTGCCTTGC GGAGCCGCGG
ATGGCGTTCG ACGGTGGTGC TGACGGCATC GACCTGGTGC GACGGATCAT CGACGGCGCC
AAAACTCATC TCGCGTCCGG CGGCGGGTTG TTGTGTGAGG TTGGCCGCTG CAAACCGGCG
ATCGAGAAGG CTTATCCGCG CGCGGATTTG CTCTGGCTCG ACACCGAGGA GTCCGAGGGC
GAGGTGTTCT GGATCGATGC CGCGACGCTT GCGGATTGTG CGCCCGCGCG ACACCCGGTC
GGCACGGCAT GA
 
Protein sequence
MRGGRSTVAT RSSAKKRRPT RAVAKTANPS AAGTPAPVLV TIFDYVRFAA ARLTRARVTV 
AHGTTDPVAE AAFLVGEAMH LHPDEVEPLA ARRVPKAAGR RILGWIEQRI ATRKPAAYLV
NRMYMRGMAF YVDERVIVPR SFIGELLDSH FGGDDVLRLR DPATVTRVLD LCTGSGCLAI
LAARAFPNAT VDAADLSADA LTVAERNVQE HRLEDRIQLA QGDLFAAVSG KRYDLIISNP
PYVDAQGMAS LPHECLAEPR MAFDGGADGI DLVRRIIDGA KTHLASGGGL LCEVGRCKPA
IEKAYPRADL LWLDTEESEG EVFWIDAATL ADCAPARHPV GTA