| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3139 |
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| Symbol | |
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| ID | 4030327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3461610 |
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| End bp | 3462722 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637971553 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_578335 |
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| Protein GI | 92118606 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGTTT CGCTCGATAC GATCGATGGC GCGATGACGT TGAAATTCGA CGTCCAGCCG
ACGGCCAATC CGACGCCCCC GACCGCGCGT ACGGAGAAGC TCGCCAACCC GGGTTTCGGC
CGGGTGTTTA CCGACCACAT GGCCGTGGTG CGCTACAATC CGGCGAAGGG CTGGCACGGC
GCGCGCGTCG AATCCCGCGC CAGCTTTTCG CTCGATCCCG CGACCGCCGT TCTGCACTAC
GCGCAGGAGA TTTTCGAAGG CCTCAAGGCT TACAAGCGTG ACGACGGCGG CGTGAACCTG
TTCCGCCCCG ACGCCAATGC GCGGCGCTTC CGCAATTCGG CCGAGCGCAT GGCGATGGCG
CCGCTCCCTG AGCCCGTGTT CATCGAAGCC ATTGAGCAAC TCGTGCGCAT CGACCGGGCC
TGGGTTCCGG GCGGTGAAGG CAGCCTGTAC CTGCGGCCCT TCATGATCGC GAACGAGGTC
TTCCTCGGCG TGAAGCCCTC GGCGGAGTAC ATCTTCGCCG TCATCGCCTC GCCGGTCGGC
TCCTATTTCA AGGGCGGCCC CGCGCCGGTC TCGATCTGGG TCTCGGAAAA CTACACGCGT
GCGGCGGTCG GCGGCACCGG CACCGTCAAA TGCGGCGGAA ACTACGCCGC CAGCCTGCGC
GCACAAGCCG AAGCCATCGA TCGCGGCTGC GATCAGGTCG TTTTCCTGGA CGCGGTCGAG
CGCCGCTACA TCGAGGAACT CGGCGGCATG AACATTTTCT TCGTGTTCGA CGACGGTTCA
CTCTCGACGC CGCCGCTCGG CACCATCCTG CCGGGCATCA CCCGCGATTC GATCATTACG
CTCGCAAAGG AATCCGGTAC GCGCGTGCGC GAGGAGCCCT ATACAATCGA CCAGTGGCGC
TCTGACGCCG CCAGCGGCAG GCTGAAAGAA GCCTTCGCCT GCGGCACGGC GGCGGTCATC
TCACCGATCG GCAAGGTGTG CTCGGCGCAC GGCGATTTCA CCATCAATGG CGGCGCCGCC
GGTCCCGTCG CGATGGGCTT TCGCAAGAAG CTGGTCGACA TCCAGTACGG CCGCGCGGCC
GACGCGCACA ACTGGACCCG CAAGGTGCTG TGA
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| Protein sequence | MGVSLDTIDG AMTLKFDVQP TANPTPPTAR TEKLANPGFG RVFTDHMAVV RYNPAKGWHG
ARVESRASFS LDPATAVLHY AQEIFEGLKA YKRDDGGVNL FRPDANARRF RNSAERMAMA
PLPEPVFIEA IEQLVRIDRA WVPGGEGSLY LRPFMIANEV FLGVKPSAEY IFAVIASPVG
SYFKGGPAPV SIWVSENYTR AAVGGTGTVK CGGNYAASLR AQAEAIDRGC DQVVFLDAVE
RRYIEELGGM NIFFVFDDGS LSTPPLGTIL PGITRDSIIT LAKESGTRVR EEPYTIDQWR
SDAASGRLKE AFACGTAAVI SPIGKVCSAH GDFTINGGAA GPVAMGFRKK LVDIQYGRAA
DAHNWTRKVL
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