Gene Nham_3110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3110 
Symbol 
ID4029899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3431235 
End bp3432746 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content66% 
IMG OID637971525 
Productaldehyde dehydrogenase 
Protein accessionYP_578307 
Protein GI92118578 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGCCA GCGAGGTTAC ATCCCTGCTC GATCGTCTTG GCGTCGCCCC CGACTGTCGG 
CGCGGCGCGC GTGCGGTGCG ATCACCGCTG ACCGGCGAGA CCATCGCCCA TGTCGAGGAT
GCAAGTCCGC AGCGCGCAGC CGAGGCCATT GCGCAGGCCG AAGCGGCATT CCGGCAATGG
CGCCATGTTC CTGCACCGCA GCGCGGCGAA CTGGTTCGCC TGCTCGGCCA TGAATTGCGC
GCCGCCAAGG ATGCACTGGG GCGCCTCGTC ACCATCGAAG CCGGCAAGAT CGTCTCGGAA
GGCCGTGGCG AGGTGCAGGA AATGATCGAC ATCTGCGATT TCGCGGTCGG CCTGTCGCGC
CAGCTTTACG GCCTCACCAT CGCCAGCGAA CGGCCCAATC ACCGGATGAT GGAGCAATGG
CATCCGCTCG GCCCGGTCGG CGTCATCACC TCATTCAATT TCCCCGTCGC GGTGTGGTCG
TGGAATGCGG CGCTGGCGCT CGTCTGCGGC AGTCCGGTGA TCTGGAAGCC GTCGGAGAAA
GCCCCGCTGG CGGCGCTGGC GGTGCAGGCG CTGTTCGAGC GCGCCGCCGC CAAGGCGGGC
AACATCCCGG ACGGCCTGTC CACGGTGCTG ATCGGCGGGC GCGATGTCGG CGAAGTGCTG
GTCGACGATC CACGCCTGCC GCTGGTGTCC GCGACCGGAT CGACTGCGAT GGGCCGCGAG
GTCGGAACGC GGCTTGCGCG GCGGTTTGCG CGCGGCATTC TCGAACTCGG CGGCAACAAC
GCCTCGATCG TCTGTCCGTC GGCAAACCTC GATCTGGCGC TACGGGCCAT CGCTTTCGCG
GCCATCGGAA CCGCCGGCCA GCGCTGCACC ACGTTGCGTC GGCTGTTCGT CCATGACAGC
ATCCACAATG AGTTCGTAGC GAGGTTGAAG CAGGTTTACG CCTCGGTTCG GATCGGCGAT
CCGCTTACGA GCGACGAGGT GCTGGTCGGT CCGCTGATCG ACCAAGCAGC ATTCCGGAAC
ATGCAGCGCG CGCTTGAGCA GGCACGGACG CACGGCGCGC GGGTCCACGG CGGCGAGCGT
GTCGATGAGA AGCGGTTTCC AAACGCGTAT TATGTCCGGC CGGCGCTGGT GGAGATGCCG
GCGCAGACCG GACCAGTGCT GCGCGAGACC TTCGCGCCGA TTCTATATGT CATGACATAC
ACCGACCTCG ACGCAGCGAT CGAGTTGCAC AATGCGGTCG CTCACGGCCT GTCGTCCTCG
ATCTTCTCGA CCGACATGCG CGAGACGGAG AAGTTCCTCT CAGCGGCGGG CTCCGACTGC
GGCATCGCCA ATGTCAATAT CGGCCCTTCC GGCGCCGAGA TCGGCGGCGC ATTCGGCGGC
GAAAAAGAAA CCGGCGGTGG TCGCGAAGCC GGCTCCGACG CCTGGAAAGC GTATATGCGA
CGTCTTACCA GCACCGTGAA CTACGGTGAC GATCTCCCGC TAGCCCAGGG CGTTCGTTTC
GACATCGGTT GA
 
Protein sequence
MLASEVTSLL DRLGVAPDCR RGARAVRSPL TGETIAHVED ASPQRAAEAI AQAEAAFRQW 
RHVPAPQRGE LVRLLGHELR AAKDALGRLV TIEAGKIVSE GRGEVQEMID ICDFAVGLSR
QLYGLTIASE RPNHRMMEQW HPLGPVGVIT SFNFPVAVWS WNAALALVCG SPVIWKPSEK
APLAALAVQA LFERAAAKAG NIPDGLSTVL IGGRDVGEVL VDDPRLPLVS ATGSTAMGRE
VGTRLARRFA RGILELGGNN ASIVCPSANL DLALRAIAFA AIGTAGQRCT TLRRLFVHDS
IHNEFVARLK QVYASVRIGD PLTSDEVLVG PLIDQAAFRN MQRALEQART HGARVHGGER
VDEKRFPNAY YVRPALVEMP AQTGPVLRET FAPILYVMTY TDLDAAIELH NAVAHGLSSS
IFSTDMRETE KFLSAAGSDC GIANVNIGPS GAEIGGAFGG EKETGGGREA GSDAWKAYMR
RLTSTVNYGD DLPLAQGVRF DIG