| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3107 |
|---|
| Symbol | |
|---|
| ID | 4029896 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 3427833 |
|---|
| End bp | 3428933 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637971522 |
|---|
| Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
|---|
| Protein accession | YP_578304 |
|---|
| Protein GI | 92118575 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAGT TCACATTGCC CGATCTGGGC GAGGGCCTCG AGGAGGCCGA AGTCGTCGCC
TGGCACGTCA ATGAGGGCGA CCATATTGTG ACCGATCAGC CGCTGCTGTC GGTGGAGACC
GACAAGGCGG TGGTCGAAGT GCCGTCGCCG TGGAGCGGAC GCATCGCGCG GCTGTGCGCG
GAGAAGGGCG ATCTGGTCAA GGTCGGCGCG CCGCTGGTGG AATTCGCCGC CGACGCCGAG
CGGGACACCG GTACGGTGGT CGGCCAGCTT GAGAGCAGCG AGGAACGCGA CGCGAAGGCC
CCAAAGGTCG CACCGGCGCG GCGAGGCACG GCACAGGCCG CGCCGGCGGT CCGTGCGCTC
GCCCAAAAAC TCGATGTCGA TCTCAACGCG GTGCAGCCGA CCGGCCCCGA TAACACCATT
ACGCGTGCGG ATGTCGAACG CGCCGCGCGC AGCCTCGCCG AGGCTGGACC GGCGCAGGTG
CTGCGCGGAA TGCGGCGCGC GATGGCGCAG CGCATGACCG CCGCACACGC CGAAGTCGTT
CCCGCCACCG TCACGGACGA CGCCGACATC GAGGAGTGGC GCAAGGACGA AGACGCCACG
ATCCGCCTGA TGCGGGCTAT CGCAGCAGCG TGCAAAGCCG AACCCGCGCT CAATACATGG
TACGATTCCC GTGCCGGCGA GCGTCGTCCG ATCACGCGCG TCGATATCGG AATCGCGATC
GACACCGAAG GTGGCCTGAT CGTGCCGATC GTGCGCAACG TCGCCGCGCG CGATGCACAT
GACTTGCGCG CCGGGCTCGA CCGGCTGCGC ACCGATGCGG CCGCGCGACG AATTCCGCCG
GAGGAATTGC GCGGCGCCAC CATCACGTTG TCGAATTTCG GCATGATCGG CGGCCGCTTC
GCGAATCTCG TTGTGGTGCC GCCGCAGGTG GCCATTGTCG GCGCCGGACG CATCGTCCAG
CGCGTGGTGG CGCATCACGG CCAGCCGGCG GTGCGCCGCG TGCTGCCGTT GTCGCTTTCG
TTCGACCATC GCGTGGTGAC CGGGGGCGAG GCCACGCGCT TCCTGATGGC GCTGAAGGCG
GATATCGAGC GCTCCGCATA G
|
|---|
| Protein sequence | MQQFTLPDLG EGLEEAEVVA WHVNEGDHIV TDQPLLSVET DKAVVEVPSP WSGRIARLCA
EKGDLVKVGA PLVEFAADAE RDTGTVVGQL ESSEERDAKA PKVAPARRGT AQAAPAVRAL
AQKLDVDLNA VQPTGPDNTI TRADVERAAR SLAEAGPAQV LRGMRRAMAQ RMTAAHAEVV
PATVTDDADI EEWRKDEDAT IRLMRAIAAA CKAEPALNTW YDSRAGERRP ITRVDIGIAI
DTEGGLIVPI VRNVAARDAH DLRAGLDRLR TDAAARRIPP EELRGATITL SNFGMIGGRF
ANLVVVPPQV AIVGAGRIVQ RVVAHHGQPA VRRVLPLSLS FDHRVVTGGE ATRFLMALKA
DIERSA
|
|---|
| |