Gene Nham_3102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3102 
Symbol 
ID4029891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp3424061 
End bp3424675 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content64% 
IMG OID637971517 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_578299 
Protein GI92118570 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0193] Peptidyl-tRNA hydrolase 
TIGRFAM ID[TIGR00447] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTGT TCGTCGGACT GGGCAATCCC GGCACGAAGT ATCAGGGTAA CCGACACAAC 
ATCGGATTCA TGGTCGTGGA CGAGATCGCG CGGCGCCACG GTTTCGCACC GTGGCGCCGC 
CGCTTTCAGG GCGAGGCCTC CGAAGGCGCG CTCGATCAGG AGCGCGTCGT TCTGCTCAAG 
CCCGCGACCT ACATGAACGA GTCCGGCAAC GCGGTTCAGG ACGCCGCGCG ATTCTTCAAG 
CTGACGGAGG GTGACGTCGT GGTGTTTCAC GACGAGATCG AGCTCCCGCC GGCCAAGGTC 
CGCGTCAAGG TCGGCGGCGG CATTGCCGGA CACAATGGCT TGCGATCGAT TTCGGCGCAT 
ATCGGCAACG AGTATCGCCG CGTCCGGCTC GGCGTCGGTC ACCCTGGCGT CAAGGAACGG 
GTGCATGCGC ACGTGCTGAA CGACTTCGCC AAGAGCGAGC GGCCCTGGGT CGAGGCGCTG 
GTGGATGTCG TGGCGGAAAA CGCGGCGCTG CTCGTGACAG CCAGGGATTC GGCGTTTCAG 
AACAAGGTGC ATCTTGCGAT GCAGGCGAAG GGATTCGTCG AGAAGGACGC CAAGGGAGAC 
AACGGCGGCA AGTAA
 
Protein sequence
MRLFVGLGNP GTKYQGNRHN IGFMVVDEIA RRHGFAPWRR RFQGEASEGA LDQERVVLLK 
PATYMNESGN AVQDAARFFK LTEGDVVVFH DEIELPPAKV RVKVGGGIAG HNGLRSISAH 
IGNEYRRVRL GVGHPGVKER VHAHVLNDFA KSERPWVEAL VDVVAENAAL LVTARDSAFQ 
NKVHLAMQAK GFVEKDAKGD NGGK