Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3085 |
Symbol | |
ID | 4030409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 3401936 |
End bp | 3402949 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637971501 |
Product | transposase IS116/IS110/IS902 |
Protein accession | YP_578283 |
Protein GI | 92118554 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGTCG AGACGCTCGG TATCGATATC GCCAAAAACG TGTTTCAACT TCACGGGGTC AATCATCATG GCAGCGTCGT GCTGAAGCGG CGTGTAATGC GCGATCAGCT TCTCGACATT ATTGCACAGG TCGAGCGCTG CACGATCGTG GTCGAAGCAT GCACGGGCGC GTTCTGCTGG GCTCGTAAGT TTGAGGCACT TGGCCACCGG GTGAAGATCA TCAGCCCGCA ATATGTGAAG CCCTTTGTGC GCCGGCAGAA GAACGACGGC AACGACGCTG AAGCGATCTG CACCGCCGCA CGCCAACCGC ACATCCCGCT CGTCCCGAAG AAGACGGTCG AGCAGCAGGA TATCCAGGCT CTGCATCGCG CTCGCCAACG CATGGTCAAT CATCGCACTG CCGTGGTCAG CCAGATCCGC GGTCTTCTGC TCGACCGCGG TTTTGCCATG GCAAAGTCAA TCACGCGTGC CAGGCGGTTG ATTCCAGAGT TTCTGTCCGA CCTGAAGAAT GACCTGACGC CAATGGCGCG CGAAGCGATT GCCGAACTCT ATGATCTTAT GCGCGATCTC GACCGCCGGA TCGGGCTGTT CGACCAGAAG ATCGATCGCG TCTTCCACAG CAGCGAGCCT TGTCAGAGGA TTGCCAAGAT CAAGGGTGTC GGTCCGAAGA CCGCCACAGC CATCGTTGCG GCGATCGGTG ACGGCGCCGA GTTCAAGAAC GGTCGCCATC TCGCCGCCTG GGTTGGCCTC GTGCCACGAC AGTTCTCCAG CGGCGATCGC ACTACGCTGA TGGGTATCTC AAAGCGGGGC AACCAGCATC TGCGTAGCCT GCTCGTTCAC GGTGCTCGGG GAGATGTTCT CCTCGCCGCG CAGCCCCTCC AGCACAATGC GGATCTTCTC TTCCGCCGAG TACTGCCGGC GGGTCTGACG TCGGATGTCC TTCAGCACTC GTTCTGCCGG CACTTTGCCC GGCCCGGATT TCTGTTTCAT CTGCGCTCCT TGCGGCTACG ATGA
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Protein sequence | MTVETLGIDI AKNVFQLHGV NHHGSVVLKR RVMRDQLLDI IAQVERCTIV VEACTGAFCW ARKFEALGHR VKIISPQYVK PFVRRQKNDG NDAEAICTAA RQPHIPLVPK KTVEQQDIQA LHRARQRMVN HRTAVVSQIR GLLLDRGFAM AKSITRARRL IPEFLSDLKN DLTPMAREAI AELYDLMRDL DRRIGLFDQK IDRVFHSSEP CQRIAKIKGV GPKTATAIVA AIGDGAEFKN GRHLAAWVGL VPRQFSSGDR TTLMGISKRG NQHLRSLLVH GARGDVLLAA QPLQHNADLL FRRVLPAGLT SDVLQHSFCR HFARPGFLFH LRSLRLR
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