Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3075 |
Symbol | |
ID | 4030399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 3392026 |
End bp | 3392838 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637971493 |
Product | transposase, IS4 |
Protein accession | YP_578275 |
Protein GI | 92118546 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGCGCA AGCAGCGAAG CCGGATGGCC AGGATCGCCC GGAAGACCAA GCGATATCCG TCTGATCTGA CAGACGAGGA ATGGGAACGG ATCGCGCCGC TGATGCCGAA ACCAGGACGC CGGGGCCGGC CGCGTGAAGT CGAATTTCGC GAAGTGATCA ACGCGGTGCG CTATCTCGTG CGCTCGGGCT GCGTGCTGCC AGTGCATTTC GGTCACTGGC GGACGGTTTA TGGCTGGTTC CGCGAGTTGG CGCGGCGCTT CCTGTTCCAG ACGATCCATG ACGTCGAACT GATGCTCGAT CGGGAACGGC AGGGGCGCGA AGCAAGCCCG TCGGCTGCGG TGATCGACAG CCAGTCGGTC AAAGCCCCGC ATAGCGAGAC GCGCGGCTAT GACGCCGGCA AGAAAATCGT TGGTCGAAAG CGCCACATCG CGGTCGACAC GGACGGGCGA TTGCTGATGA TCAATCTGAC AACCGCCGAC ATCTCCGACA GCGCAGGCGC GCAAGCGATC CTCGATGCGA TCCGCAAACG CTGGCCGTGG GTGAAACATC TGTTCGCCGA CGCCGCCTAC GACCGGTTGA AACTGATGGA CAAAGCCGTC TATCTGCAGT TCGTACTCGA AATCATCCGA CGCCGCGACG GGCAGAAGGG CTTCGAAGTC CTGCCGCGCC GCTGGGTGGT CGAACGAACT TTCGGCTGGA TGATCCGCTG GCGCAGGCTC GTGCGTGATT ACGAACGTCG CATCGATGTC TCAACCGCCA TGATCCATGT CGCCATGGCC GGTGTCCTCA TCCGCAGAAA CGCTCATCCC TGA
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Protein sequence | MWRKQRSRMA RIARKTKRYP SDLTDEEWER IAPLMPKPGR RGRPREVEFR EVINAVRYLV RSGCVLPVHF GHWRTVYGWF RELARRFLFQ TIHDVELMLD RERQGREASP SAAVIDSQSV KAPHSETRGY DAGKKIVGRK RHIAVDTDGR LLMINLTTAD ISDSAGAQAI LDAIRKRWPW VKHLFADAAY DRLKLMDKAV YLQFVLEIIR RRDGQKGFEV LPRRWVVERT FGWMIRWRRL VRDYERRIDV STAMIHVAMA GVLIRRNAHP
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