| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3058 |
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| Symbol | |
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| ID | 4030959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3377413 |
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| End bp | 3378624 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637971482 |
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| Product | transposase IS116/IS110/IS902 |
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| Protein accession | YP_578264 |
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| Protein GI | 92118535 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.116967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGTCT TCGATGGTGA GGTGGCTCGC CCTACACTGC GCGTCCGAGG GTTGCTCGGG
CAGGCCGAGC CGATCCTCAC CACAGGAGGA CGAGCCGTGC AGGATTATAG AGAAGCTTTT
GTCGGGATCG ATGTTGCCAA ACTGAAGAAT GCGGTCGCGG TTGCAGACGG CGGCCGAAAC
GGAGAGATCC GTTATTTCGG TGAAGTCGAG TCATCGGACG CGAGTATGCG CCGGGCGATC
CAGCGAATCG CCTCAAGATT TGACCACGTA TATTTTTGTT ATGAGGCTGG TCCCACCGGT
TATGGCCTAT ATCGGTTGAT CCGTTCGCTC GGTTACGACT GCTTAGTGGT CGCCCCGTCG
TTAATCCCAA GGAAGCCGGG CGATCGGGTG AAGACAAACC GGCGGGACTC GCTATCGCTC
GCCCGGCTGT TGAGGGCCGG CGAGCTGACG GCGGTATGGG TTCCGGACGA GGGTCATGAG
GCCATGCGGG ATCTTGTGCG CGCTCGTGCG GCCGCCGTCG AGACATTACG CGTGCATCGG
CAGCAGATCA GCGCTTTCAT GCTCAAGCAT GGCCGTATCT ATCCCCGCAA GAAGGGCTGG
ACGATGCGCT ACCTGCGCTG GCTGCAGGAA CAGAAGTTTG AACATCCCGC CCATCAGATC
GCTCTCCAGG AAATGGTTGA GGCGGTCCGC ATCTCGAAAG AACGAGTGGA AAGACTGGAA
AGGGTGATCG AGGAGTTTGT GCCCGAGTGG TCTCTCGCGC CGGTCGTCCG GGCGTTGCAG
ACATTGCGCG GCGTAGATCT GATCGTCGCC GTGACATTCA CCACCGAAGT CGGCGATGTA
CGTCGGTTTG AGAGCCCTCG TCAATTAATG GGCTATCTCG GTCTCGTTCC CGGAGAACGA
TCAACCGGAG AGACAGTCAG ACAGAGCGGC ATTACCAAGG CCGGAAACGG CCGCGTTCGG
CACATGCTTG TCGAAAGTGC ATGGACCTAT CGGCATCCGC CCCGCGTCGG CAAGGTGAAA
CTTTACCGGC TTGAGCAAGC GCCGCAAGCG GTGCGCGAGA TCGCATGGAA AGCGCAGAGC
CGATTGACCG CACGTTACCG GATGTTGATC GGACGGGGCA AGCGGACGAC GGTAGTCTGC
ACGGCGATCG CTCGCGAATT GGTCGGCTTC ATGTGGGCCG TTGCAAGGGA GGCGCAGCCG
AGGTTGCAAT AG
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| Protein sequence | MSVFDGEVAR PTLRVRGLLG QAEPILTTGG RAVQDYREAF VGIDVAKLKN AVAVADGGRN
GEIRYFGEVE SSDASMRRAI QRIASRFDHV YFCYEAGPTG YGLYRLIRSL GYDCLVVAPS
LIPRKPGDRV KTNRRDSLSL ARLLRAGELT AVWVPDEGHE AMRDLVRARA AAVETLRVHR
QQISAFMLKH GRIYPRKKGW TMRYLRWLQE QKFEHPAHQI ALQEMVEAVR ISKERVERLE
RVIEEFVPEW SLAPVVRALQ TLRGVDLIVA VTFTTEVGDV RRFESPRQLM GYLGLVPGER
STGETVRQSG ITKAGNGRVR HMLVESAWTY RHPPRVGKVK LYRLEQAPQA VREIAWKAQS
RLTARYRMLI GRGKRTTVVC TAIARELVGF MWAVAREAQP RLQ
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