| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3048 |
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| Symbol | |
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| ID | 4032060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3360131 |
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| End bp | 3362353 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637971472 |
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| Product | ABC transporter related |
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| Protein accession | YP_578254 |
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| Protein GI | 92118525 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCAAC GAATTTCCGA TAACGCCGGG CCCGATCGCG ACGCTGCGGT GCCCCCGGCC
GCCAGCCAGC CAGAGCGCCC GAACTTGCAG GCACGGACCG CGCTCGAATG TCTGGCGAGC
GTCGCAAGAC ACCATGGCAT TGATCTGGCC GCCGACCGGT TGCGCCATTT GTATGCCGTC
GATAATGCGC CGATGTCGCA GGCGCGGATT CAGCGCATCG CCAAGGAAGC AGGGATGCGC
GCGCGGGCGG CGCATCTGAA CTGGGACAGG TTGCACCGGC TTGGCGAGAT CTATCCGGTG
GTGGCTCAAC TTGCCAATGG CAACTGGGTT CTCGTGCTTG GAGCCCAAGA CGGCCCGGCA
GGCGAGGCGG TGAGTGTTTT CGATCCGCTT GCGGAGCGAC CGGATCCACT GGTCATCAAA
AAAAACTGCT TCTGTGCGAA CTGGCACGGC GACGTGCTGT TGATCAAGCG AGATCGCGGG
GCATCTGGAG CGCCGCGAAA ATTCGGCTTC CGCTGGTTCG CCCCCGAATT GTTGCGCGAG
CGGAGGCTGC TCGCCGATGT GGCCGTGGCC GCCGTGCTGC TCTATGCGCT CGGTTTGGTC
ATTCCACTAT TCTTCCAGTT GGTCATCGAC AAGGTCCTGG TGCACGAGAG CTTCACGACG
CTCTATGTGC TGGCGGCAGG CGCGGTGATC GCGCTGCTGT TCGATTCGGT GTTCAGCTTC
CTGCGCCGTT ATCTGTTGCT CTATGCCACG AACAAGATCG ACATTCGTGT TGCGACGAAA
ACGTTTGGGC ATCTTCTGGG TTTGCCGATC AGCTTCTTTG AACACATTTC GTCCGGCGTG
CTCGTGAAGC ATATGCAGCA GGCGACGCGC ATCCGGGAAT TTCTGACCGG ACGTTTGTTC
CTGACCTTGC TTGATGCTCT GTCGCTTCTG GTCTTCCTTC CTGTGCTTGC TCTCTACAGC
CTCAAGCTGA CGTGCCTGGT GCTGGCTTTC ACGGCCCTCA CCGGAGTTGT GGTCACCCTG
CTGGTGGGGC CGTTCCGGCG ACGTCTTTAC GGTCTTTACC AGGCCGAGGG CGCGCGTCAG
GCATTGCTAG TCGAGGCCGT GCATGGAATG CGCACCGTCA AATCGCTGGC GATGGAGCCG
CTGCAGGGAA GGGTGTGGGA TGATCGTTGC GCGCAGTCCG TTTCGATGAG ATTCGGTGTC
GAGAAAATAT CGGCTGCCGC GCAATCGGTC ACAGGCTTTC TGGAAAAGCT GATGACGCTC
GGAATCATCG GCCTTGGCGC CCTTGATGTC TTCAGCGGTG AGATGACGAT CGGTGCGCTG
GTTGCTTTCA ATATGCTGGC TGGTCGCGTC TCCGGGCCGC TCGTCCAGAT GGTGACGATG
GTTCATGAAT ATCAGGAAGT CGCCCTGGCC GTGCAAATGC TCGGTGAGAT CATGAACCAG
GCTCGCGAGC GAGAGGGCAA GCGGGATGGG TTGCGTCCTG AACTGGACGG GCATATCGAA
TTCGAGAATG TGTCGTTTCG CTACGGTCCG GAGGGGCCCC CGGCGCTCGA CAACATCTCG
TTCACGATTC CAGCGGGGAG CGTGTTTGGC ATTGTCGGCC GAAGCGGTTC CGGCAAGACG
ACGCTGACCC GCATGATCGC CGGCCTGTAT CCGATTCAGC AGGGTCTGTT GCGCATCGAC
GGGTTCGACT CGCGCGAGCT GGATCTCGTT CATCTGCGCA AGAGTCTCGG GCTTGTCCTG
CAGGAGAATT TCCTGTTTTG CGGCACCGTT CGCGAGAACA TCACATGCGC CAAGCGCGGG
GCCACTTTCG AGGAAGTTGC CCAGGCGGCA CGCCTTGCAG GCGCCGACGA GTTCATCGAG
CGGCTGCCGC GCGGCTTCGA TACCATGCTG GAAGAGAATG CCGAAAATCT TTCCGGCGGC
CAGCGGCAGC GCCTCGCCAT CGCGCGAGCT CTGATCACCA ATCCGCGTTT GCTGATTCTC
GACGAGGCGA CGAGCGCGCT GGACGCCGAA AGCGAAACGA TCATTCGTCG AAACCTTCGG
CGCATCGCGG AAGGGCGCAC GGTCATCATT GTTTCTCACC GGCTGTCGAT GCTGTCGGAT
GCCAACGCAA TCCTAGTGAT TGATCGCGGC CGGGTCTCTG ACCTGGGTCA TCATGATCAG
CTGATGAAGA ACTGCACGGC CTATCGGCAG CTTTGGAATC AGCAGATGAA GCAAATCGCA
TGA
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| Protein sequence | MLQRISDNAG PDRDAAVPPA ASQPERPNLQ ARTALECLAS VARHHGIDLA ADRLRHLYAV
DNAPMSQARI QRIAKEAGMR ARAAHLNWDR LHRLGEIYPV VAQLANGNWV LVLGAQDGPA
GEAVSVFDPL AERPDPLVIK KNCFCANWHG DVLLIKRDRG ASGAPRKFGF RWFAPELLRE
RRLLADVAVA AVLLYALGLV IPLFFQLVID KVLVHESFTT LYVLAAGAVI ALLFDSVFSF
LRRYLLLYAT NKIDIRVATK TFGHLLGLPI SFFEHISSGV LVKHMQQATR IREFLTGRLF
LTLLDALSLL VFLPVLALYS LKLTCLVLAF TALTGVVVTL LVGPFRRRLY GLYQAEGARQ
ALLVEAVHGM RTVKSLAMEP LQGRVWDDRC AQSVSMRFGV EKISAAAQSV TGFLEKLMTL
GIIGLGALDV FSGEMTIGAL VAFNMLAGRV SGPLVQMVTM VHEYQEVALA VQMLGEIMNQ
AREREGKRDG LRPELDGHIE FENVSFRYGP EGPPALDNIS FTIPAGSVFG IVGRSGSGKT
TLTRMIAGLY PIQQGLLRID GFDSRELDLV HLRKSLGLVL QENFLFCGTV RENITCAKRG
ATFEEVAQAA RLAGADEFIE RLPRGFDTML EENAENLSGG QRQRLAIARA LITNPRLLIL
DEATSALDAE SETIIRRNLR RIAEGRTVII VSHRLSMLSD ANAILVIDRG RVSDLGHHDQ
LMKNCTAYRQ LWNQQMKQIA
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