Gene Nham_3045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3045 
Symbol 
ID4032057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3356517 
End bp3357434 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content62% 
IMG OID637971469 
Productglycosyl transferase family protein 
Protein accessionYP_578251 
Protein GI92118522 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.144194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCAG ACGGCCCCCT GATCTCCGTT GTTATCCCTC ACCTCAACCA GGCAGGGGAC 
CTCGGGGCCT GTCTTGCCAG CCTCCAGAGC CAGCGCCTCT CTCCCGCCCT GTTCGAGATC
ATTGTGATTG ATAACGGATC GACCTCGCCC CCCGTCGAGG TCATGGCCCG CTATCCCTCT
GCTCGCCTGC TGCACGAGCC AGAGCCCGGC CCCGGTCCGG CCCGCAACGC TGGGGTTCGA
CATGCGACCG GCGAAATTCT GGCGTTTATC GATGCTGATT GCCGGGCCGA TCCTGATTGG
CTGCTGAATG TCGCGCAGGC CCTGCGATCT TTGCCCGGCA AGACCATCGT CGGCGGCGAC
GTCCGCATCT GGCCGCGGAA CAAGGAAACG CTGACCGCGG TGGAAGCGTA TGAAAGCGTC
TTCGGATTCC GGAACAAGCT GTATATCGAA CGTCACGGCT ACTCGATCAC GGCGAACCTC
AGTGCCCGGC GGGCCGACCT CGACAAGATC GAGCCGTTTG TCGGCATCCA GTTCGCGGAG
GATATGGAAT GGGGCGAACG CGCCCGCAGC GCCGGGTTTC AGTTTCACTT TCTTCCGAAT
GCGATTGTCT TTCACCCCGC GCGCCGCTCG CTGCGCGAGC TCTGCGTGAA GTGGGACCGC
CAGATTCAGC ACTATCTGAA TATGGCTCAG GGCAAGCCCG CGTGGAAACT TCGCTGGGTG
CTCCGCTCCG TCGCAGTTCT GGGGTCTCCC ATCATCGACC TCGCCACCGT CGTCAGCAGC
GACCGGATAC ATGGCGTCAC GACTCGCCTC AAGGCCATTA TGATTCTGGT CGCGATCCGC
GCCCATCGCG CACGAAAGAT GCTCAGCCTG CTGCGGCAGA GCAATACGGT GCTCTGGAAT
CGGAGCGCTG GCGTATGA
 
Protein sequence
MDSDGPLISV VIPHLNQAGD LGACLASLQS QRLSPALFEI IVIDNGSTSP PVEVMARYPS 
ARLLHEPEPG PGPARNAGVR HATGEILAFI DADCRADPDW LLNVAQALRS LPGKTIVGGD
VRIWPRNKET LTAVEAYESV FGFRNKLYIE RHGYSITANL SARRADLDKI EPFVGIQFAE
DMEWGERARS AGFQFHFLPN AIVFHPARRS LRELCVKWDR QIQHYLNMAQ GKPAWKLRWV
LRSVAVLGSP IIDLATVVSS DRIHGVTTRL KAIMILVAIR AHRARKMLSL LRQSNTVLWN
RSAGV