Gene Nham_3042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3042 
Symbol 
ID4032054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3353138 
End bp3354397 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content58% 
IMG OID637971466 
ProductUDP-glucose/GDP-mannose dehydrogenase 
Protein accessionYP_578248 
Protein GI92118519 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.247493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGAAA TCAAGAAAGT CGCTGTTATC GGCCTCGGCT ATATCGGCTT GCCCACGGCG 
GCTGTGATTG CGAGCCGAGG CATGAAGGTT GTCGGGATCG ATACAAACCC GGACATCGTG
AAAACGGTTG CATCGGGCAC GATCCATATT GTCGAGCCGG ACCTCGATGG ACTGGTGCAA
AAAGTCGTGT CGAATGGCTC GCTGGTCGCG ATGCTGGAGC CCGAGCAGGC CGATGTCTTC
ATAATCGCCG TTCCAACGCC GATCGACAGC GCCAACCGGC CGGACCTGAC ATGCGTGATG
GCGGCTATCG AGCGCATCAC CGATCTGCTC AGGCCGGGAA ATATCGTCAT TCTCGAATCC
ACGTCGCCGG TCGGAACGAC TGAAACGGTC GCAAGGAAGA TCATCGAGAG GCGCCCCGAT
CTCAGTATCG GATCCGTAAA CGGCGAGGAG CCGATCTCCG TTGCCTATTG CCCTGAACGG
GTATTGCCGG GCCGCATATT GTCCGAACTG GTCAACAACG ATCGTTGTAT CGGCGGTATC
AGCACGTTGT GCGCAAGGCG CGCTCAGCGC TTTTACAAGA TGTTTGTCCG AGGGGCATGT
GTGGCAACGA CGGCGCGGGC GGCGGAATTG GTCAAACTGA CCGAGAATGC GTATCGCGAC
ACCAATATCG CGTTTGCAAA TGAGTTATCT CTGATCTGCG ACCGCTATGG GATCAATGTC
TGGGAAGTCA TCGACCTGGC TAACCGGCAT CCCCGGGTCA ATGTGTTGCG GCCGGGGCCC
GGTGTCGGCG GTCACTGTAT CGCGGTTGAT CCCTGGTTCA TCATCGATTC AGTCCCCGAT
CTCGCGCGCG TGATGAGGAC GAGCCGCGAA GTTAATAATC GCAAGACGGA AACCATCATC
GAGCGCGCGA TCGCACTGAT CGACGACCAC CCTTATGCGA ACGTTGCCTG CTGCGGCCTG
ACCTTCAAGG CGAATGTCGA TGACCTGCGC GAGAGTCCCG CGTTCGACAT CGCGCTGCAT
CTGGCCGCTA AATATGGATC GCGCATCAGG ATTGTCGAGC CGAACCTGCG CCGGATTCCG
GCAGAACTGG CCAAGCACGG CGCGGAAATA GTGCGCATCG AGGAGGCGAT GCACTCCTGC
GAAATCGCGC TTCTTCTGGT CGATCACGAC GAATTCAAAA TGATTCCGCT CGCCGAGCGG
CGCCATCTCG ACGTGATCGA TACGCGCGGC ATTTGGCAAG ACATGCCGGT CCGAACGTGA
 
Protein sequence
MLEIKKVAVI GLGYIGLPTA AVIASRGMKV VGIDTNPDIV KTVASGTIHI VEPDLDGLVQ 
KVVSNGSLVA MLEPEQADVF IIAVPTPIDS ANRPDLTCVM AAIERITDLL RPGNIVILES
TSPVGTTETV ARKIIERRPD LSIGSVNGEE PISVAYCPER VLPGRILSEL VNNDRCIGGI
STLCARRAQR FYKMFVRGAC VATTARAAEL VKLTENAYRD TNIAFANELS LICDRYGINV
WEVIDLANRH PRVNVLRPGP GVGGHCIAVD PWFIIDSVPD LARVMRTSRE VNNRKTETII
ERAIALIDDH PYANVACCGL TFKANVDDLR ESPAFDIALH LAAKYGSRIR IVEPNLRRIP
AELAKHGAEI VRIEEAMHSC EIALLLVDHD EFKMIPLAER RHLDVIDTRG IWQDMPVRT