Gene Nham_3039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3039 
Symbol 
ID4032051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3349712 
End bp3351160 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content57% 
IMG OID637971463 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_578245 
Protein GI92118516 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTTCC TGTTGCTTTC GATCGCGATC CTGTCGCGAC TGCTGACGCC CGAGGAGTTC 
GGCGTATTTG CTATTGTCAA TGCGCTCACC ACGGTGACAG CGGCATCTTT TCAGGAGTTT
GGCGGGGCGA ACTACCTGAT CCAGAAATCG TCGCTCTCCC GACGAAACAT CAGAACATCG
TTCACGATCA CGTTCTGTAT GTCGATACTG ATCGGCGCTC TGCTGTTCGC GATCAAGGAT
GATCTGGCTG CGTTTTTCGG TCAGCAGGCG CTGGCGACGG GCATCGCCGT TTCAGTGCTG
AACTTCCTGC TGTGGCCGCT TTCGATAACG GTATCGGCGC TTTTCAGACG CGATATGGAG
TTTGGCGCAC TGGCGGTTTG TAATCTGACC GCTAATTTCA TAACGGCAGT GGTCTCGATT
GTTCTTGCGA TGATGAGCTA CAGTTATATG GCTCCGATCT GGGGCACGGT TGTAGGTAAT
GTGATTCTCG CGGTCTTCCT GATTTTGTGG CGAAGGGAAT TCGGGCTTTT TCGTCCATCG
CTGGCGGGAT ATCGCGACGT CTTTGCGTTT GGCTTCTATT CCAGCGGCGT TGCGATCATC
AACGTGTTCT ACAGCTTCGC GCCACAGTTG ATCCTCGCGC GAACGCTGAA CCTCGCGGCT
GTTGGTCTCT ACAGCCGCGC CGTGAGCGTC ACGCAGATTT TCGACAGAAT GGTTGTTCAG
GTCTTGTCGC CGGTGATCAT GCCGGCAATT TTCTCACACA CCAAGGCCGG AGGCGATTTG
AAGACAGTTT ACCTGACATC GGTGGAACTG CTGTCGTCGG TTCAGTGGCC GTTCCTAATG
TTCGTCGCGA TCATGGCCCA TCCGCTGATC CTGGTTTGGC TGGGCCCAAC CTGGCTGGAA
ATCGTTCCAT TGGTCCGGCT TCTGTGCATC GGCTATCTTG CGTTGTTTGC CGCCTGCCTG
ACCTATCCGG TTCTGGTGGC GGTCGGACGC GTGCGTGATG CATTGACCGC GTCGCTGATC
TCGCTTCCAC CGTCGCTGTT GCTGATCAGC GTTGCCTCGT TCTATGGTGT CGAGGCAGTT
GCGGCGACGG CGCTCGTCGC CCTTCCATTC CAGACCTTTG TCGCGATTTA CTACATTAGC
AGGCATATCG GCATGAGCTT CTCTGAATTC TTCCGCGCAA CCGTCAAGAG TGCGGCCGTT
GCCTTATGCA GTTCCGCGGG AGCGCTCCTT GCTGCTCTCG CGGTGCAGCT TGGACTGGTC
GGATCAGGCG CGGGGTTGAT TGCCGGTGGG ATTCTGGCGG GTGCGGGATG GCTGCTTGGC
CTTTTTCTGA CCGGCCATCC TTTGCTCAAT CATCTTCGTG CTGCTGCCAA GGAACTGAGG
TTTGCTCTAC CGAGATCCGG ATTTGCTGCG GGAGGCGCCG TCGCGCGCTC GGCGAAGAAA
TCCGCTTGA
 
Protein sequence
MFFLLLSIAI LSRLLTPEEF GVFAIVNALT TVTAASFQEF GGANYLIQKS SLSRRNIRTS 
FTITFCMSIL IGALLFAIKD DLAAFFGQQA LATGIAVSVL NFLLWPLSIT VSALFRRDME
FGALAVCNLT ANFITAVVSI VLAMMSYSYM APIWGTVVGN VILAVFLILW RREFGLFRPS
LAGYRDVFAF GFYSSGVAII NVFYSFAPQL ILARTLNLAA VGLYSRAVSV TQIFDRMVVQ
VLSPVIMPAI FSHTKAGGDL KTVYLTSVEL LSSVQWPFLM FVAIMAHPLI LVWLGPTWLE
IVPLVRLLCI GYLALFAACL TYPVLVAVGR VRDALTASLI SLPPSLLLIS VASFYGVEAV
AATALVALPF QTFVAIYYIS RHIGMSFSEF FRATVKSAAV ALCSSAGALL AALAVQLGLV
GSGAGLIAGG ILAGAGWLLG LFLTGHPLLN HLRAAAKELR FALPRSGFAA GGAVARSAKK
SA