Gene Nham_3022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3022 
Symbol 
ID4032151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3325345 
End bp3326394 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content58% 
IMG OID637971446 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_578228 
Protein GI92118499 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGACC GGGCCGCGGT ATTGGTGACT GGCGGTGCTG GCTATATTGG CTCGCACTGC 
TGCAAGGCGT TGGCCGAAGC CGGATACCGT CCGGTCTGCT TCGACAATTT TTCGACAGGT
CATCGGCGCT TCGTGAAGTG GGGTCCCATG ATCACCGGAG ATGTCCGGGA CCCGAGGCAA
CTTCAGGCGG TCTTCCAGTC ATATGATTTT TCTGCGGTCA TGCATTTTGC GGCCTCCAGT
TCGGTGGGGG AGTCGGTCAC TGATCCGCAA AAGTACTACG CGAACAATGT CGGCGGCACG
CTGGCGCTGC TGAGCGCGAT GCGCGGGGCA GGCAGCGGGC GGCTGGTGTT CTCCAGCACG
GGTGCGGTCT ACGGAAATGC GGGATCGGAA AGCGCGCCCC GGTTTCCGGT CAATCCCTAT
GGCAAGTCGA AGTTGATGAT TGAGGAAATC CTGTCCGACT ATCGGCAGGC CTATGATCTC
AATTCAGTTT GCTTCAGGTA CTTCAATGCG AGCGGCGCCG ATGCGTGTGG AGCGATTGGC
GAATGCCGCG ATCCGGAAAC CCATTTGATT CCGCGGGCGA TGATGGCCCT GCAAGGAGAG
ATTCCTGACT TCGGCATTTT TGGGGACGAC TACGATACGC CCGATGGTAC CGCAGTCCGC
GACTACATTC ATGTCACTGA CCTTGTCAGT GCGCACGTCC AGGCGGTGAA CATGCTAATG
GGGGGCATGC GGGGTGTCTA CAACCTGGGT ACCGGCGTCG GATATTCCGT GAGCGAGGTT
TTATCTGCAA TCTTCGCGGA GGCAGGATCG AAGATGCCGC GGGTTTATTA CCCGAGGCGT
CCGGGTGATC CATCCGTTTT AATCGCGGAT TCTTCGGTCG CTCGAATGCA TCTCGGATTT
AATCCTATCC ATTCCAACCT CGGGACGATC ATACGCACGG CATGGAACTG GCACACCAAA
GGCGCATTTG AGCAGTTGCG GGGAGGCCGG AGATCCACGG TTTCGATCTC GCTTCAACGC
GCGCGATCGC CGAACCATGA TTTGAATTAA
 
Protein sequence
MADRAAVLVT GGAGYIGSHC CKALAEAGYR PVCFDNFSTG HRRFVKWGPM ITGDVRDPRQ 
LQAVFQSYDF SAVMHFAASS SVGESVTDPQ KYYANNVGGT LALLSAMRGA GSGRLVFSST
GAVYGNAGSE SAPRFPVNPY GKSKLMIEEI LSDYRQAYDL NSVCFRYFNA SGADACGAIG
ECRDPETHLI PRAMMALQGE IPDFGIFGDD YDTPDGTAVR DYIHVTDLVS AHVQAVNMLM
GGMRGVYNLG TGVGYSVSEV LSAIFAEAGS KMPRVYYPRR PGDPSVLIAD SSVARMHLGF
NPIHSNLGTI IRTAWNWHTK GAFEQLRGGR RSTVSISLQR ARSPNHDLN