Gene Nham_2979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2979 
Symbol 
ID4033244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3278212 
End bp3279600 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content61% 
IMG OID637971417 
Producthypothetical protein 
Protein accessionYP_578199 
Protein GI92118470 
COG category[S] Function unknown 
COG ID[COG5361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.293037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGCTCT CGCCGGAATG GGCTCGCGCG CTGCCGCCCG GCCCCGATGC CCGAGTGAAA 
ATCACCGAGG CCTATGCGGC CCACGTCGCG CGCGACGTCT TCTTCTGGGC CTGGCCGCTG
GTCAACATGT ACAATCGACG GCTTGCGTTC TCGAAGATGA CCGAACAGCG GTACGTCGGC
CCATTGCTCG AGGCGCCGCT CAACCGGCTC ACCATGCTCA CGGATTATGT CGATCCGGAA
GAACGGAACG TCGCGTGCCC GAACCAGGAC GTGGTTTACG GGCTCGGCAT GGTCGCGCTG
GAGGTTTCTC CGGTGGTGGT TCAGGTGCCG GATTTCGGTG ATCGCTTTTG GGTCTATCAG
ATCGTCGATC TGCGCACCGA CAGCTTCGTC CAGCTCGGCA AGATGCACGG GAGTACGCCG
GGTTTTTACC TTCTTGTCGG GCCTAACTGG AATGGTCAGG TGCCGAATGG AATCACCCGC
GTCTTCCGCG CATCGAGCAA TACCGGCCTT GTTGCGCCAC GGATCGCCCA GAACGACACT
CCGGAAGACA AGCGTGCGAT TCAGGGCGCG CTGACCGGGA TCGCGATGTA TCCGCTCGCG
GAATACGATG GGCGGATGAA GAGCATTGAG TGGAGCAAGT TGCCTAAAGT GCCCGGCGCG
CCTCCCGGCG AAGAGGAAAC GCGGTGGGTG TACCCTGAAA AGTTTTTCGA CGAGCTTCCC
ATGGTGCTCG CCGACGCGCC ACCGCTGTCA GGCGAAGAAG CATGCTACGC GCAGGTGCTC
GCCGTGCTGG CTGCCGCCAA AGACAATCCG AAAATAAAGC AGGCGATGAT CGGGGCCGCG
AAAGACGCCG AAGAGAAGCT GGTGAATCCG TTGTTCCAGT TCCGCAACTA TGGCCAGCAG
CTTCCCCACC ACTGGAGCAC GATCTCCAAC GAGTCCGCGT TCGGGACGGA CTATTTCACG
CGGACGGCGG TTGCGAAATC GAACATCCTC GTCAACTCGC CCGACGAGAC CAAGTATTTC
TACCAGGACT TCGATGCCTC GGGCGCACGG CTCAACAGTT CCAACCGCTA CACCGTGACG
TTCGCGAAGG ACGGCACGCC GCCTGTGAAT GGTTTCTGGT CGCTCTCGAT CTACAACGAG
CACCATTTCT TTGTCGCCAA CCCGATTAAC CGCTTCTCGG TCGGCACCAA GAACAAGGAT
CTCAAATTTG CCGCCGACGG TTCGCTCACA ATCTACGTGC AGTCCGATGC GCCCACGGAT
GCGGTGCAGC GAGCCAACTG GTTGCCGGCA CCGAAAGGCA ACTTTTCGCT CTTCGGCCGC
GCTTATTGGC CGAAAGTGCC AGTTCTGGAC GGCACCTGGA CGCCGCCGGC GGTGCAGCGT
GTAAGCTGA
 
Protein sequence
MPLSPEWARA LPPGPDARVK ITEAYAAHVA RDVFFWAWPL VNMYNRRLAF SKMTEQRYVG 
PLLEAPLNRL TMLTDYVDPE ERNVACPNQD VVYGLGMVAL EVSPVVVQVP DFGDRFWVYQ
IVDLRTDSFV QLGKMHGSTP GFYLLVGPNW NGQVPNGITR VFRASSNTGL VAPRIAQNDT
PEDKRAIQGA LTGIAMYPLA EYDGRMKSIE WSKLPKVPGA PPGEEETRWV YPEKFFDELP
MVLADAPPLS GEEACYAQVL AVLAAAKDNP KIKQAMIGAA KDAEEKLVNP LFQFRNYGQQ
LPHHWSTISN ESAFGTDYFT RTAVAKSNIL VNSPDETKYF YQDFDASGAR LNSSNRYTVT
FAKDGTPPVN GFWSLSIYNE HHFFVANPIN RFSVGTKNKD LKFAADGSLT IYVQSDAPTD
AVQRANWLPA PKGNFSLFGR AYWPKVPVLD GTWTPPAVQR VS