| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2977 |
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| Symbol | |
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| ID | 4033127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3277009 |
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| End bp | 3277950 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637971415 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_578197 |
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| Protein GI | 92118468 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGATCG CGCTCATGGT GCTGTATCTG GCGCTGCTCT TTACCCTGGT GTGGCTCGGT
CTTATCCGAT TCAACGCCTT CTGGAAGACG TCGCCGCTGA TCGTGCTGTT GCTGCTCAAT
GTTCTGCTGT TCATCCCGAT GGGCTGGGGC GCACCTGAGG GCAAGGCGCT GGTTTACCGC
AATTCGGTAT CAATCGTGCC CAATGTAGCA GGCGAGGTCG TCGACGTGCC CGTCGCACCA
AACACGCCGC TGAAGCAGGG CGATGTGCTT TTCAAGATCG ATCCGACGCC CTACGACGCA
CAGCTGAAGG CGATCGAGGC TCAACTGAAG CTGTCGACCA CCCGCCTTGG GCAGATGGCG
ACGCTCTACG AACGCGAGGC TGGCCGGGGG TTCGATGTCG AGCAGCGCCA GTCCGAAGTC
GATCAGTTCA AGGCGCAACT TGAAAACGCG CGGTGGAATC TCGACAAGAC CGTCGTGCGC
GCGCCCGCCG ACGGCTACGT GACGAACCTC GCCCTGCGAA AGGGCGCGCG CGTGGGAAAC
CTTTCCGTTT CGCCCGTCAT GGCTTTCATA GATACGTCCA CCACGAACGT CGCGGTCGAA
ATCGACCAAA TCAACGCGCG CTACGTCGCT CCCGGTCAGG ACGTGGAAAT CGCATTCAAG
TTCGCTCCGG GGCGGGTCTT CACGGGCAAG GTGGAAAGCA TCCTGCAGGC GGTCGCGACC
GGGCAAGCGC AGGTTTCGGG CGCGGCAGTG ACGCCGAAGG AAATCACCAC CGTGCCTTTC
GTCGTCCGTA TCGCGATGGA CGATCCCGAT TTCGCCAGAA CGCTTCCGGC CGGGGCCACC
GGAACGGCGG CCATCTTCAC CGATCATGTG AAGATCAGCC ATGTGATCCG CCGCGTTTTG
TTGCGGCAAG TCGCCATTCT CGATTACATC AACCCATTCT GA
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| Protein sequence | MMIALMVLYL ALLFTLVWLG LIRFNAFWKT SPLIVLLLLN VLLFIPMGWG APEGKALVYR
NSVSIVPNVA GEVVDVPVAP NTPLKQGDVL FKIDPTPYDA QLKAIEAQLK LSTTRLGQMA
TLYEREAGRG FDVEQRQSEV DQFKAQLENA RWNLDKTVVR APADGYVTNL ALRKGARVGN
LSVSPVMAFI DTSTTNVAVE IDQINARYVA PGQDVEIAFK FAPGRVFTGK VESILQAVAT
GQAQVSGAAV TPKEITTVPF VVRIAMDDPD FARTLPAGAT GTAAIFTDHV KISHVIRRVL
LRQVAILDYI NPF
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