| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2965 |
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| Symbol | |
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| ID | 4033116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3259484 |
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| End bp | 3261937 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637971407 |
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| Product | nitrite reductase (NAD(P)H) large subunit, NirB |
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| Protein accession | YP_578189 |
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| Protein GI | 92118460 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATGA TCTCCGACTC GCGCGAACAT CTGGTCGTCA TCGGCAATGG CATGGCGGGC
ATGCGCACTG TGGAAGAGCT GCTCAAGCTG GTCCCCGGCC GCTTCCGCAT CACCGTGTTC
GGCGCTGAAC CGCACGTGAA CTACAACCGC ATCATGCTTT CCGGTGTGCT GGCGGGTGAC
AAGACGGTGG AGGAGATCGT CATCAACAGC CGCGAATGGT ACGCGCAAAA CGACATCGCC
CTGATCACGG GTGATGCCGT CACGCGCATT GATCGCGGCG ACCGCATGGT GCATTCCGCG
TCAGGACTGT CGGTGCATTA TGATCGGCTG CTGGTGGCGA CCGGCTCAAG GCCGGTGGCA
CCGCCGATCC CCGGCCTGAG TTTGCCGGGT GTCTGCGCCT TCCGCGATAT TGCCGATGTC
GAGACCATGC TGGCGGTCTC GCGCGAACAC AGGCGCGCCG TGGTGATCGG CGGCGGCCTG
CTAGGCCTGG AAGCGGCCTG GGGCCTAAAG CAGCGCGGCA TGAAAGTGGC GCTGGTCCAT
TTAATGCCCA CGTTGATGGA ACGCCAGCTC GATGCGGCGG CGGGCCAGAT GCTACAGCGT
GACCTGGATG GCCGTGGCAT CGCCTTTTTC ACCAACGGCC AGACCGAGGA GATCGTCGGC
AAGCACCGCG CCGAGGGCGT GACGCTGGCC GATGGGCGTT TCGTGCCGGC TGACCTTGTG
GTGCTGGCCG TCGGCATCCG CCCCAACATA GACTTGGCCA GGAACGCCGA GTTGGAGGTC
AATCGCGGCA TCGTCGTCAG CGATGACATG CGGACTTCCG ATCCCGCCAT TTTCGCGGTG
GGCGAATGCG TCGAGCATCG CGGCAAGGTC TTCGGCCTGG TGGCTCCGAT CTGGGATCAG
GCCAAGGTCT GCGCCGCGCG CATGGCCGGT GACGAGAACG CGCTGTTCGT GTCGCGCGAC
ATCTCCACCA GCCTCAAGAT TACCGGTGTG GATGTGTTCT CGGCGGGGGC GCTATGCGCC
GCCAGCGAGC ACGATGACGA GATCACGCTG CGTGATGACC GCCGGGGGAT ATACAAGAAG
ATCGTGCTGC GCGACGGCAG GCTGGTCGGC GCGGTGCTGT ACGGCGATGT GACGGACGGC
CAATGGTACC TGCAGCTGAT GCGCGACAAG GAGGATATCT CGGCTCTGCG CGACCGGCTG
GTGTTCGGCA AGGCGCTGGC GGGTGCCAGC GTATCGGCTG AACCGGATTA CGCGTCCATG
CCTGACGATG CACAGATCTG CGGCTGCAAC GGCGTGTGCA AGGGAACCAT CGTTTCGACG
ATCCAGGCCA GGAAGCTCAC GTCCTTAAGC GAGGTGCGCG CACATACCAA GGCATCGGCT
TCCTGCGGCC AGTGCACCGC GCAGGTCGAA GGGCTGTTGG CCTTTGCCGT TGGCGGTGCG
GTGGAGAAGA GAAAGAAGAC GGTGTGCGAA TGCACCGACG CCGGCCATGA CGAGGTGCGC
CGGGCCATCC TGGCGGAAAA CCTCAAAACC ATGGAGGCGG TGCGCGACCG TTTCGGCTGG
AAGAATCCGG AAGGCTGCGC CAAATGCCGT CCGGCGCTGA ACTACTATCT GCTCTGTGCC
TGGCCGGGCG AATATGCCGA TGACGCCCAG TCGCGTTTTG TCAACGAGCG CGTGCACGCC
AATATTCAGA AGGACGGCAC CTACAGCGTG GTGCCGCGCA TGTGGGGCGG GTTGACCAAC
CCGAAGGAAC TGCGTGCCAT CGCCGATGTC ACCGAGCATT TTAATATTCC CACCGTCAAG
GTCACGGGCG GGCAGCGCAT CGACCTGCTC GGGGTGAAGA AGGAAGACCT GCCCGGCGTG
TGGAAGATGC TGAACGAAGC GGGCATGGTG TCTGGTCATG CCTATGCCAA GGGTCTGCGC
ACGGTGAAGA CCTGCGTCGG CAGCGAATGG TGCCGTTTCG GCACCCAGGA TTCCACTGGC
CTGGGCGTGA AGCTGGAAAA GCTCACCTGG GGCAGTTGGA CACCGCACAA GACGAAGATG
GCGGTGTCGG GTTGTCCGCG CAATTGTGCC GAGGCTACCA TCAAGGACAT GGGCGTGGTC
TGTGTCGAGG CCGGCTATGA TCTTGTGGTC GGCGGCAATG GCGGCGTTGA CGTGCGCGTC
ACTGACAAGC TGGTGCAGGT GAAAACGGAA GAGGAGGTGT TGGAATACGC TGCCGCCTTC
ATGCAGCTTT ACCGTGAGGA AGCGCATTAT CTAGAGCGCA CCGCGCCCTG GATCGGGCGG
GTGGGTGTGA CGTATGTGAA ACAGCGCCTG GTGGAGGATG AGCCCGGGCG CAAGGCCTTG
CAGGCGCGCT TCCTGCGCTC GCAGGAAGCA GCACAGGTGG ATCCATGGAA TGAGCGGGTA
AAGGGGGCGC AAGCGCACGA ATTCCAGCGC CTGCCCGAAT TGGCGAGGAC GTGA
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| Protein sequence | MNMISDSREH LVVIGNGMAG MRTVEELLKL VPGRFRITVF GAEPHVNYNR IMLSGVLAGD
KTVEEIVINS REWYAQNDIA LITGDAVTRI DRGDRMVHSA SGLSVHYDRL LVATGSRPVA
PPIPGLSLPG VCAFRDIADV ETMLAVSREH RRAVVIGGGL LGLEAAWGLK QRGMKVALVH
LMPTLMERQL DAAAGQMLQR DLDGRGIAFF TNGQTEEIVG KHRAEGVTLA DGRFVPADLV
VLAVGIRPNI DLARNAELEV NRGIVVSDDM RTSDPAIFAV GECVEHRGKV FGLVAPIWDQ
AKVCAARMAG DENALFVSRD ISTSLKITGV DVFSAGALCA ASEHDDEITL RDDRRGIYKK
IVLRDGRLVG AVLYGDVTDG QWYLQLMRDK EDISALRDRL VFGKALAGAS VSAEPDYASM
PDDAQICGCN GVCKGTIVST IQARKLTSLS EVRAHTKASA SCGQCTAQVE GLLAFAVGGA
VEKRKKTVCE CTDAGHDEVR RAILAENLKT MEAVRDRFGW KNPEGCAKCR PALNYYLLCA
WPGEYADDAQ SRFVNERVHA NIQKDGTYSV VPRMWGGLTN PKELRAIADV TEHFNIPTVK
VTGGQRIDLL GVKKEDLPGV WKMLNEAGMV SGHAYAKGLR TVKTCVGSEW CRFGTQDSTG
LGVKLEKLTW GSWTPHKTKM AVSGCPRNCA EATIKDMGVV CVEAGYDLVV GGNGGVDVRV
TDKLVQVKTE EEVLEYAAAF MQLYREEAHY LERTAPWIGR VGVTYVKQRL VEDEPGRKAL
QARFLRSQEA AQVDPWNERV KGAQAHEFQR LPELART
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